RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 HLA-DRB3P79483 266 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 OR2F1Q13607 317 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 ZNF345Q14585 488 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 MSMO1Q15800 293 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 LCNL1Q6ZST4 164 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 FOXRED2Q8IWF2 684 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 RNF152Q8N8N0 203 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 LRTM2Q8N967 370 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 ADAD2Q8NCV1 583 aaKnown RBP4.56□□□□□ -1.68
RNF4-217ENST00000511892 KLHL30-AS1Q8NEE0 82 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 OR11H4Q8NGC9 324 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 MRAPQ8TCY5 172 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 TMEM230Q96A57 120 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 GALMQ96C23 342 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 RCC1LQ96I51 464 aaKnown RBP4.56□□□□□ -1.68
RNF4-217ENST00000511892 DUX3Q96PT4 197 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 P2RX4Q99571 388 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 RASL11BQ9BPW5 248 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 NABP2Q9BQ15 211 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 ZNF251Q9BRH9 671 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 HDHD3Q9BSH5 251 aaPredicted RBP4.56□□□□□ -1.68
RNF4-217ENST00000511892 PDCD10Q9BUL8 212 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 RSRP1Q9BUV0 290 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 PARP12Q9H0J9 701 aaKnown RBP4.56□□□□□ -1.68
RNF4-217ENST00000511892 IFI27L2Q9H2X8 130 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 NAA60Q9H7X0 242 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 RAB9BQ9NP90 201 aa4.56□□□□□ -1.68
RNF4-217ENST00000511892 DYNC2H1Q8NCM8 4307 aaKnown RBP4.56□□□□□ -1.68
RNF4-217ENST00000511892 TRBV6-7A0A0A0MS04 114 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 TEX13DA0A0J9YY54 714 aaPredicted RBP4.55□□□□□ -1.68
RNF4-217ENST00000511892 WI2-2373I1.2A0A1W2PRP0 233 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 GPR31O00270 319 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 ATP6V1G1O75348 118 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 PROP1O75360 226 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 PPYP01298 95 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 IGHG4P01861 327 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 IGF1P05019 195 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 CT45A6P0DMU7 189 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 CT45A5P0DMU8 189 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 CT45A7P0DMV0 189 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 LYL1P12980 280 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 S100A1P23297 94 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 HOXD3P31249 432 aaPredicted RBP4.55□□□□□ -1.68
RNF4-217ENST00000511892 S100A11P31949 105 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 MYCNOSP40205 109 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 SUPT4H1P63272 117 aaKnown RBP4.55□□□□□ -1.68
RNF4-217ENST00000511892 SLC35B1P78383 322 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 EGFEM1PQ0D2K5 195 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 FOXE3Q13461 319 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 KIAA0141Q14154 515 aaPredicted RBP4.55□□□□□ -1.68
RNF4-217ENST00000511892 OPCMLQ14982 345 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 DEFB136Q30KP8 78 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 LGALSLQ3ZCW2 172 aaPredicted RBP4.55□□□□□ -1.68
RNF4-217ENST00000511892 RPL39P5Q59GN2 51 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 Q5BKY6 102 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 C11orf87Q6NUJ2 197 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 TEX38Q6PEX7 206 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 ZNF695Q8IW36 515 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 CMTM1Q8IZ96 169 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 LGI3Q8N145 548 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 COMMD1Q8N668 190 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 NPBQ8NG41 125 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 OR8H1Q8NGG4 311 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 THAP6Q8TBB0 222 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 CASTOR1Q8WTX7 329 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 IL1F10Q8WWZ1 152 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 MAFIPQ8WZ33 124 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 IL22RA2Q969J5 263 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 RAX2Q96IS3 184 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 C2orf50Q96LR7 162 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 AGMATQ9BSE5 352 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 TOLLIPQ9H0E2 274 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 FXYD6Q9H0Q3 95 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 OR1A1Q9P1Q5 309 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 ZNF580Q9UK33 172 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 STAB2Q8WWQ8 2551 aa4.55□□□□□ -1.68
RNF4-217ENST00000511892 RYR3Q15413 4870 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 FXYD6-FXYD2A0A087WZ82 144 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 TRAV14DV4A0A0A6YYC5 116 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 IGHV7-81A0A0B4J1V7 117 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 IGKV1-6A0A0C4DH72 117 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 C5orf51A6NDU8 294 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 NUDT19A8MXV4 375 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 G3V318 75 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 CCL24O00175 119 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 ITGB1BP1O14713 200 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 RAB29O14966 203 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 NBR2O15453 112 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 NDUFA3O95167 84 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 SIX6O95475 246 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 MPC2O95563 127 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 RLN2P04090 185 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 ELANEP08246 267 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 SCTP09683 121 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 AADACP22760 399 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 PSMB8P28062 276 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 PSMB6P28072 239 aa4.54□□□□□ -1.68
RNF4-217ENST00000511892 PPIFP30405 207 aaKnown RBP4.54□□□□□ -1.68
RNF4-217ENST00000511892 NUP62P37198 522 aaPredicted RBP4.54□□□□□ -1.68
RNF4-217ENST00000511892 CEACAM6P40199 344 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms