RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 OR2B8PP59922 312 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 OR51H1Q8NH63 302 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 CMTM3Q96MX0 182 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 PLEKHA2Q9HB19 425 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 S1PR2O95136 353 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 OR2C1O95371 312 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 HLA-AP01891 365 aaKnown RBP13.6□□□□□ -0.23
TPM3-220ENST00000509601 APOA1P02647 267 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 HERV-K104P61576 105 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 AADACL3Q5VUY0 350 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 OR5H2Q8NGV7 314 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 CD300LFQ8TDQ1 290 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 HRASLSQ9HDD0 168 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 PEMTQ9UBM1 199 aa13.6□□□□□ -0.23
TPM3-220ENST00000509601 IGLV11-55A0A075B6I3 123 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 IGHV3-23P01764 117 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 REG1AP05451 166 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 ELK1P19419 428 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 EDN2P20800 178 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 F2RP25116 425 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 HLA-DMAP28067 261 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 TAS2R46P59540 309 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 ZNF585BQ52M93 769 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 CCDC140Q96MF4 163 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 RCHY1Q96PM5 261 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 NAA50Q9GZZ1 169 aaKnown RBP13.59□□□□□ -0.23
TPM3-220ENST00000509601 TMEM140Q9NV12 185 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 S4R3C0 116 aa13.59□□□□□ -0.23
TPM3-220ENST00000509601 IGLC7A0M8Q6 106 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 ZNF785A8K8V0 405 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 GGCTO75223 188 aaKnown RBP13.58□□□□□ -0.24
TPM3-220ENST00000509601 RPA2P15927 270 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 HRH1P35367 487 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 LPAR6P43657 344 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 FAM209BQ5JX69 171 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 CLEC19AQ6UXS0 136 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 GPHB5Q86YW7 130 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 Q8N402 240 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 OR6F1Q8NGZ6 308 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 BORCS5Q969J3 196 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 FXYD6Q9H0Q3 95 aa13.58□□□□□ -0.24
TPM3-220ENST00000509601 TEX50A0A1B0GTY4 177 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 HPGDSO60760 199 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 RLN1P04808 185 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 FGF2P09038 288 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 SMIM18P0DKX4 95 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 HIST1H1BP16401 226 aaKnown RBP13.57□□□□□ -0.24
TPM3-220ENST00000509601 CTF1Q16619 201 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 DEFB114Q30KQ6 69 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 DMBX1Q8NFW5 382 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 OR10W1Q8NGF6 305 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 FCAMRQ8WWV6 532 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 DGCR14Q96DF8 476 aaKnown RBP13.57□□□□□ -0.24
TPM3-220ENST00000509601 TM2D3Q9BRN9 247 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 COMMD9Q9P000 198 aa13.57□□□□□ -0.24
TPM3-220ENST00000509601 STARD9Q9P2P6 4700 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 C2orf70A6NJV1 201 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 LGALS9O00182 355 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 GPR31O00270 319 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 DHFRP00374 187 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 CLEC3BP05452 202 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 RORCP51449 518 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 CD300EQ496F6 205 aaPredicted RBP13.56□□□□□ -0.24
TPM3-220ENST00000509601 LCN12Q6JVE5 192 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 SNX29P2Q8IUI4 249 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 SGPP2Q8IWX5 399 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 CADM3Q8N126 398 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 OR2K2Q8NGT1 345 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 SRSF8Q9BRL6 282 aaKnown RBP13.56□□□□□ -0.24
TPM3-220ENST00000509601 COMMD5Q9GZQ3 224 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 SCPEP1Q9HB40 452 aa13.56□□□□□ -0.24
TPM3-220ENST00000509601 MFSD2BA6NFX1 497 aa13.55□□□□□ -0.24
TPM3-220ENST00000509601 DEFA4P12838 97 aa13.55□□□□□ -0.24
TPM3-220ENST00000509601 FOLR2P14207 255 aa13.55□□□□□ -0.24
TPM3-220ENST00000509601 ARL3P36405 182 aa13.55□□□□□ -0.24
TPM3-220ENST00000509601 EEF1AKMT3Q96AZ1 226 aa13.55□□□□□ -0.24
TPM3-220ENST00000509601 QTRT1Q9BXR0 403 aaKnown RBP13.55□□□□□ -0.24
TPM3-220ENST00000509601 MARCH11A6NNE9 402 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 KRASP01116 189 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 WT1-ASQ06250 92 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 CMTM1Q8IZ96 169 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 ZNF502Q8TBZ5 544 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 ZMAT4Q9H898 229 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 NDUFA4L2Q9NRX3 87 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 RYR2Q92736 4967 aa13.54□□□□□ -0.24
TPM3-220ENST00000509601 TRBV7-1A0A0A6YYK4 115 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 C3orf84H3BNL1 204 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 GABARAPO95166 117 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 CBLN1P23435 193 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 PTBP1P26599 531 aaKnown RBP eCLIP13.53□□□□□ -0.243e-9■■■■□ 20.8
TPM3-220ENST00000509601 G6PCP35575 357 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 TSPAN5P62079 268 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 HAGHQ16775 308 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 PHLDA2Q53GA4 152 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 LINC00322Q6ZN03 302 aaPredicted RBP13.53□□□□□ -0.24
TPM3-220ENST00000509601 OR1L8Q8NGR8 309 aa13.53□□□□□ -0.24
TPM3-220ENST00000509601 CXorf58Q96LI9 332 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms