RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ZNF532Q9HCE3 1301 aa0.83□□□□□ -2.28
GYPB-207ENST00000506679 COL4A1P02462 1669 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 MED13Q9UHV7 2174 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 WDR90Q96KV7 1748 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 MEIKINA0A087WXM9 373 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 MDFIC2A0A1B0GVS7 189 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 ZNF860A6NHJ4 632 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 A8MUN3 132 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 J3QQQ9 107 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 PSMD12O00232 456 aaPredicted RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 LST1O00453 97 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 NOS1APO75052 506 aaPredicted RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 RPP14O95059 124 aaKnown RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 TNNC2P02585 160 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 C1QAP02745 245 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 BPGMP07738 259 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 MSMBP08118 114 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 SRP19P09132 144 aaKnown RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 ZNF705DP0CH99 300 aaPredicted RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 FGF6P10767 208 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 MAP2K4P45985 399 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 CSN1S1P47710 185 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 REG1BP48304 166 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 IDH3GP51553 393 aaPredicted RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 OR4D2P58180 307 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 TPI1P60174 286 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 SPCS3P61009 180 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 TMEM258P61165 79 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 RPL26P61254 145 aaKnown RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 ITGB3BPQ13352 177 aaPredicted RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 SAPCD1Q5SSQ6 148 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 C9orf64Q5T6V5 341 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 SYPL2Q5VXT5 272 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 SPOPLQ6IQ16 392 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 SSX8Q7RTT4 187 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 C20orf196Q8IYI0 205 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 DYNAPQ8N1N2 210 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 ZNF625Q96I27 306 aaPredicted RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 CCDC42Q96M95 316 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 UCK1Q9HA47 277 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 C8orf4Q9NR00 106 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 UBAP1Q9NZ09 502 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 RPL26L1Q9UNX3 145 aaKnown RBP0.82□□□□□ -2.28
GYPB-207ENST00000506679 COQ4Q9Y3A0 265 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 RALGAPA2Q2PPJ7 1873 aa0.82□□□□□ -2.28
GYPB-207ENST00000506679 GREB1Q4ZG55 1949 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 PTPRBP23467 1997 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 FLG2Q5D862 2391 aaPredicted RBP0.81□□□□□ -2.28
GYPB-207ENST00000506679 KIF13BQ9NQT8 1826 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 TRAV7A0A075B6U4 112 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 A0A0G2JQZ4 141 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 TMEM269A0A1B0GVZ9 245 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 PQLC2LA1A4F0 135 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 IRGMA1A4Y4 181 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 EEF1E1-BLOC1S5C9J1V9 151 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 F8W036 122 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 NFYAP23511 347 aaPredicted RBP0.81□□□□□ -2.28
GYPB-207ENST00000506679 MSNP26038 577 aaKnown RBP0.81□□□□□ -2.28
GYPB-207ENST00000506679 S100A7P31151 101 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 CCR2P41597 374 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 CDKN2CP42773 168 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 IFITM2Q01629 132 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 GRK1Q15835 563 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 TPRXLQ17RH7 258 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 AKIRIN2Q53H80 203 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 TMEM42Q69YG0 159 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 C8orf74Q6P047 294 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 ZNF705AQ6ZN79 300 aaPredicted RBP0.81□□□□□ -2.28
GYPB-207ENST00000506679 TRAPPC5Q8IUR0 188 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 LRRC25Q8N386 305 aaPredicted RBP0.81□□□□□ -2.28
GYPB-207ENST00000506679 C10orf126Q8N4M7 172 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 RPP25LQ8N5L8 163 aaKnown RBP0.81□□□□□ -2.28
GYPB-207ENST00000506679 OR8B12Q8NGG6 310 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 OR1L8Q8NGR8 309 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 ANKRD7Q92527 254 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 PPP1R14BQ96C90 147 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 DCUN1D1Q96GG9 259 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 IMMP2LQ96T52 175 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 TTTY13Q9BZ97 58 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 COMMD5Q9GZQ3 224 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 CHST6Q9GZX3 395 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 PRTFDC1Q9NRG1 225 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 USP24Q9UPU5 2620 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 NCOA1Q15788 1441 aa0.81□□□□□ -2.28
GYPB-207ENST00000506679 MAST2Q6P0Q8 1798 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 DENND4BO75064 1496 aaPredicted RBP0.8□□□□□ -2.28
GYPB-207ENST00000506679 CPAMD8Q8IZJ3 1885 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 TRBV20OR9-2A0A075B6H5 130 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 TMSB15BA0A087X1C1 80 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 TRAV38-1A0A0B4J264 116 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 IGHV1-18A0A0C4DH31 117 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 RFPL4AA6NLU0 287 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 CLDN24A6NM45 220 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 RFPL4AL1F8VTS6 287 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 INMT-MINDY4F8WBC2 141 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 H7C2G1 150 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 I3L521 148 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 KPNA3O00505 521 aaPredicted RBP0.8□□□□□ -2.28
GYPB-207ENST00000506679 LEPROTO15243 131 aa0.8□□□□□ -2.28
GYPB-207ENST00000506679 NSA2O95478 260 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms