RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 CTDSPLO15194 276 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 PGLYRP1O75594 196 aaPredicted RBP6.9□□□□□ -1.3
PTPN20-215ENST00000505814 OR9G9P0C7N8 305 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 P0C879 139 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 TBPP20226 339 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 INSL3P51460 131 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 RND3P61587 244 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 OR2B11Q5JQS5 317 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 C9orf66Q5T8R8 295 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 OR4A47Q6IF82 309 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 TMEM65Q6PI78 240 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 VKORC1L1Q8N0U8 176 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 SPAG16Q8N0X2 631 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 ARRDC1Q8N5I2 433 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 OR1N2Q8NGR9 330 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 OR5H2Q8NGV7 314 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 OR52I2Q8NH67 350 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 OR4A5Q8NH83 315 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 SMIM4Q8WVI0 70 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 BORCS5Q969J3 196 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 ISOC1Q96CN7 298 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 SPIN2AQ99865 258 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 SPIN2BQ9BPZ2 258 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 SRSF8Q9BRL6 282 aaKnown RBP6.9□□□□□ -1.3
PTPN20-215ENST00000505814 ZNF2Q9BSG1 426 aaPredicted RBP6.9□□□□□ -1.3
PTPN20-215ENST00000505814 IFT46Q9NQC8 304 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 LSM4Q9Y4Z0 139 aaKnown RBP6.9□□□□□ -1.3
PTPN20-215ENST00000505814 CEPT1Q9Y6K0 416 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 A3GALT2U3KPV4 340 aa6.9□□□□□ -1.3
PTPN20-215ENST00000505814 TENM3Q9P273 2699 aa6.9□□□□□ -1.31
PTPN20-215ENST00000505814 BIRC6Q9NR09 4857 aa6.9□□□□□ -1.31
PTPN20-215ENST00000505814 IGLC7A0M8Q6 106 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 MSGN1A6NI15 193 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 FAM223BA6NKX1 122 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 LINC01619G3V211 115 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 GABARAPH6UMI1 98 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 J3QRK9 145 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 CTDSP2O14595 271 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 TNFSF12O43508 249 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 S1PR2O95136 353 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 HPRT1P00492 218 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 HRASP01112 189 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 IGKV1-39P01597 117 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 PMP2P02689 132 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 IGKV1D-39P04432 117 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 HSPB1P04792 205 aaKnown RBP6.89□□□□□ -1.31
PTPN20-215ENST00000505814 FCER2P06734 321 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 CTRB1P17538 263 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 F2RP25116 425 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-215ENST00000505814 TPPP2P59282 170 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 OR2B8PP59922 312 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 MRPS10P82664 201 aaKnown RBP6.89□□□□□ -1.31
PTPN20-215ENST00000505814 SSBP1Q04837 148 aaKnown RBP6.89□□□□□ -1.31
PTPN20-215ENST00000505814 CATR1Q13166 79 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 TNXAQ16473 311 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 CTRB2Q6GPI1 263 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 ACSM6Q6P461 480 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 MZT2AQ6P582 158 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 IL34Q6ZMJ4 242 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 TMEM17Q86X19 198 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 SNX29P2Q8IUI4 249 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 CLVS1Q8IUQ0 354 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-215ENST00000505814 FAM223AQ8IWN6 122 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 CD300LFQ8TDQ1 290 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 DCUN1D4Q92564 292 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 DLX4Q92988 240 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-215ENST00000505814 USMG5Q96IX5 58 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 SLC2A9Q9NRM0 540 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 SIGLEC8Q9NYZ4 499 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 EXTL2Q9UBQ6 330 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 KLK11Q9UBX7 282 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 ZNF257Q9Y2Q1 563 aa6.89□□□□□ -1.31
PTPN20-215ENST00000505814 IGLV11-55A0A075B6I3 123 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 TRAV3A0A0B4J244 114 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 A0A0G2JLM5 398 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 MARCH11A6NNE9 402 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 GPR31O00270 319 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 UPK2O00526 184 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 TRBV12-3P01733 135 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 TRGV3P03979 118 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 RLN1P04808 185 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 MYOD1P15172 320 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 NQO2P16083 231 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 HLA-GP17693 338 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 HLA-DMAP28067 261 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 RPL27AP46776 148 aaKnown RBP6.88□□□□□ -1.31
PTPN20-215ENST00000505814 MECP2P51608 486 aaKnown RBP6.88□□□□□ -1.31
PTPN20-215ENST00000505814 FXYD4P59646 89 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 HERV-K104P61576 105 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 RPL8P62917 257 aaKnown RBP6.88□□□□□ -1.31
PTPN20-215ENST00000505814 DGCR2P98153 550 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 KLF5Q13887 457 aaPredicted RBP6.88□□□□□ -1.31
PTPN20-215ENST00000505814 TMEM229BQ8NBD8 167 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 OR5T1Q8NG75 326 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 OR6F1Q8NGZ6 308 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 C15orf40Q8WUR7 153 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 ZNF486Q96H40 463 aaPredicted RBP6.88□□□□□ -1.31
PTPN20-215ENST00000505814 ZNF414Q96IQ9 312 aa6.88□□□□□ -1.31
PTPN20-215ENST00000505814 FYTTD1Q96QD9 318 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms