RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 C1orf220Q5T0J3 134 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 OR11H7Q8NGC8 314 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 C2orf50Q96LR7 162 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 SLC17A5Q9NRA2 495 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 ANAPC10Q9UM13 185 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 MYLKQ15746 1914 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 A0A1W2PQF6 199 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 C11orf94C9JXX5 98 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 PLA2G5P39877 138 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 RAG2P55895 527 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 SYNJ2BPP57105 145 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 RHOGP84095 191 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 PPP1R1AQ13522 171 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 RPL39P5Q59GN2 51 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 ATOH8Q96SQ7 321 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 SEC11CQ9BY50 192 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 SH3BGRL3Q9H299 93 aa4.4□□□□□ -1.71
MATR3-211ENST00000505625 RP1P56715 2156 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 KIF26AQ9ULI4 1882 aaPredicted RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 APOHP02749 345 aaPredicted RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 ZP3P21754 424 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 PAX9P55771 341 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 OTUD1Q5VV17 481 aaPredicted RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 LINC00305Q7Z4B0 112 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 OR9G1Q8NH87 305 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 ZNF721Q8TF20 911 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 PDLIM5Q96HC4 596 aaKnown RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 FANCD2OSQ96PS1 177 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 SF3B5Q9BWJ5 86 aaKnown RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 XCL2Q9UBD3 114 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 E9PLN8 166 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 LDLRAD4O15165 306 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 CSRP1P21291 193 aaKnown RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 OPRL1P41146 370 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 TIMM23BQ5SRD1 257 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 TOMM20LQ6UXN7 152 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 OR11H4Q8NGC9 324 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 TMEM54Q969K7 222 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 CNRIP1Q96F85 164 aaPredicted RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 ZNF625Q96I27 306 aaPredicted RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 VKORC1Q9BQB6 163 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 C19orf24Q9BVV8 132 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 CMC2Q9NRP2 79 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 SPNP16150 400 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 PPIFP30405 207 aaKnown RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 UCP3P55916 312 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 DEFA6Q01524 100 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 CLLU1Q5K131 121 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 GCSAMQ8N6F7 178 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 ST6GALNAC3Q8NDV1 305 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 MSRB2Q9Y3D2 182 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 COL4A5P29400 1685 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 FCN3O75636 299 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 CA2P00918 260 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 EVI2AP22794 236 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 GLIPR1P48060 266 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 FHITP49789 147 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 ICAM4Q14773 271 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 FAM219BQ5XKK7 198 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 BPIFA4PQ86YQ2 179 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 TMEM183AQ8IXX5 376 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 NEUROG3Q9Y4Z2 214 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 PXMP4Q9Y6I8 212 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 ASPDHA6ND91 283 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 ZNF25P17030 456 aaPredicted RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 IER3P46695 156 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 MGAT2Q10469 447 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 CLPPQ16740 277 aaPredicted RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 PLPPR5Q32ZL2 321 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 C8orf82Q6P1X6 216 aaPredicted RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 MRPL30Q8TCC3 161 aaKnown RBP4.39□□□□□ -1.71
MATR3-211ENST00000505625 FBLIM1Q8WUP2 373 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 RMI2Q96E14 147 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 LRRC3BQ96PB8 259 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 SLC35B3Q9H1N7 401 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 RNF167Q9H6Y7 350 aa4.39□□□□□ -1.71
MATR3-211ENST00000505625 IGHV4-4A0A075B6R2 117 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 A0A1W2PQM1 296 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 A6NNC1 897 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 CXorf1O96002 111 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 RFPL3SP0C7P2 107 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 TRGC1P0CF51 173 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 CD28P10747 220 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SELLP14151 372 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 IGHV1-2P23083 117 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SRIP30626 198 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 EFNA4P52798 201 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SSBP2P81877 361 aaPredicted RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 HIST3H3Q16695 136 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 MPV17LQ2QL34 196 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 MESTQ5EB52 335 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SAPCD1Q5SSQ6 148 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 SIGLEC15Q6ZMC9 328 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 LFNGQ8NES3 379 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 Q8NFD4 153 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 EMCNQ9ULC0 261 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 NUP214P35658 2090 aaPredicted RBP4.38□□□□□ -1.71
MATR3-211ENST00000505625 DSPPQ9NZW4 1301 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 MAP1LC3B2A6NCE7 125 aa4.38□□□□□ -1.71
MATR3-211ENST00000505625 PRB2P02812 416 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms