RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 C4orf17Q53FE4 359 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 SSX9Q7RTT3 188 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 MRPL41Q8IXM3 137 aaKnown RBP8□□□□□ -1.13
COL1A1-210ENST00000504289 C15orf54Q8N8G6 183 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 BEND2Q8NDZ0 799 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 SLC24A4Q8NFF2 622 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 TMEM167AQ8TBQ9 72 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 LEAP2Q969E1 77 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 FLYWCH2Q96CP2 140 aaKnown RBP8□□□□□ -1.13
COL1A1-210ENST00000504289 RNF5Q99942 180 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 NABP2Q9BQ15 211 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 TXNDC17Q9BRA2 123 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 MAP1LC3BQ9GZQ8 125 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 TMEM133Q9H2Q1 129 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 NPVFQ9HCQ7 196 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 MANBALQ9NQG1 85 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 VAX2Q9UIW0 290 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 WASHC3Q9Y3C0 194 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 AMMECR1Q9Y4X0 333 aaPredicted RBP8□□□□□ -1.13
COL1A1-210ENST00000504289 OR51B2Q9Y5P1 312 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 A0A087WWC5 75 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 A0A1W2PN81 502 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 A0A1W2PPE3 182 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 SMCO3A2RU48 225 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 FAM74A7A6NL05 159 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 TMEM250H0YL14 139 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 PLAUP00749 431 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 CCL3L1P16619 93 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 NPY1RP25929 384 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 CHRNA7P36544 502 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 NPBWR1P48145 328 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 PSMB3P49720 205 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 PNRC1Q12796 327 aaPredicted RBP7.99□□□□□ -1.13
COL1A1-210ENST00000504289 ZNF726P1Q15940 193 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 BSXQ3C1V8 233 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 FAM74A3Q4VXF1 159 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 C2orf83Q53S99 150 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 C11orf71Q6IPW1 123 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 FAM122CQ6P4D5 195 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 ZNF841Q6ZN19 808 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 SLC35E3Q7Z769 313 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 TGIF2LXQ8IUE1 241 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 ABHD12Q8N2K0 398 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 RPP25LQ8N5L8 163 aaKnown RBP7.99□□□□□ -1.13
COL1A1-210ENST00000504289 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.99□□□□□ -1.13
COL1A1-210ENST00000504289 LY6G5BQ8NDX9 201 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 OR8B3Q8NGG8 313 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 OR10G9Q8NGN4 311 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 OR10G7Q8NGN6 311 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 OR1L8Q8NGR8 309 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 CACNG8Q8WXS5 425 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 OR8B2Q96RD0 313 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 PLEKHA3Q9HB20 300 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 DOCK11Q5JSL3 2073 aa7.99□□□□□ -1.13
COL1A1-210ENST00000504289 TRAV3A0A0B4J244 114 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 IGLV1-47P01700 117 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 IGHV3-7P01780 117 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 IFNA4P05014 189 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 GRNP28799 593 aaKnown RBP7.98□□□□□ -1.13
COL1A1-210ENST00000504289 MAS1LP35410 378 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 RPL8P62917 257 aaKnown RBP7.98□□□□□ -1.13
COL1A1-210ENST00000504289 VMA21Q3ZAQ7 101 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 RNF212Q495C1 297 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 FFAR4Q5NUL3 377 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 UTF1Q5T230 341 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 TREML4Q6UXN2 200 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 C1orf122Q6ZSJ8 110 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 VKORC1L1Q8N0U8 176 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 C11orf42Q8N5U0 333 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 HARBI1Q96MB7 349 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 NIPSNAP3BQ9BS92 247 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 C19orf24Q9BVV8 132 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 MRPL20Q9BYC9 149 aaKnown RBP7.98□□□□□ -1.13
COL1A1-210ENST00000504289 LSM4Q9Y4Z0 139 aaKnown RBP7.98□□□□□ -1.13
COL1A1-210ENST00000504289 RFNGQ9Y644 331 aa7.98□□□□□ -1.13
COL1A1-210ENST00000504289 YLPM1P49750 1951 aaKnown RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 LAMA5O15230 3695 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 TEX50A0A1B0GTY4 177 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 C7orf77A4D0Y5 90 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 CXorf65A6NEN9 183 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 M0R1W7 72 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 RRHO14718 337 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 IGKV1-16P04430 117 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 LIPFP07098 398 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 SAA1P0DJI8 122 aaPredicted RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 FOLR2P14207 255 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 COL8A2P25067 703 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 GPX4P36969 197 aaPredicted RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 RPL29P47914 159 aaKnown RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 COMPP49747 757 aaPredicted RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 SUB1P53999 127 aaKnown RBP eCLIP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 ERVFRD-1P60508 538 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 FLI1Q01543 452 aaPredicted RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 SSX2Q16385 188 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 HAGHQ16775 308 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 HLA-DRB5Q30154 266 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 AWAT1Q58HT5 328 aa7.97□□□□□ -1.13
COL1A1-210ENST00000504289 WDR25Q64LD2 544 aaPredicted RBP7.97□□□□□ -1.13
COL1A1-210ENST00000504289 ACSM6Q6P461 480 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms