RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 OPN1MW3P0DN78 364 aa16.17■□□□□ 0.18
CDC42SE2-206ENST00000503291 GNB1P62873 340 aa16.17■□□□□ 0.18
CDC42SE2-206ENST00000503291 SSBP2P81877 361 aaPredicted RBP16.17■□□□□ 0.18
CDC42SE2-206ENST00000503291 TNXAQ16473 311 aa16.17■□□□□ 0.18
CDC42SE2-206ENST00000503291 ZNF562Q6V9R5 426 aa16.17■□□□□ 0.18
CDC42SE2-206ENST00000503291 ZNF429Q86V71 674 aa16.17■□□□□ 0.18
CDC42SE2-206ENST00000503291 C2orf50Q96LR7 162 aa16.17■□□□□ 0.18
CDC42SE2-206ENST00000503291 QTRT1Q9BXR0 403 aaKnown RBP16.17■□□□□ 0.18
CDC42SE2-206ENST00000503291 RNASE1P07998 156 aaKnown RBP16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 FGF2P09038 288 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 UBA52P62987 128 aaKnown RBP16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 CX3CL1P78423 397 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 FOXRED2Q8IWF2 684 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 OR1S1Q8NH92 325 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 HSPB9Q9BQS6 159 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 PDCD10Q9BUL8 212 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 COMMD5Q9GZQ3 224 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 FKBP11Q9NYL4 201 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 FOXA2Q9Y261 457 aaPredicted RBP16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 OR51B2Q9Y5P1 312 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 IGHV7-81A0A0B4J1V7 117 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 FAM181BA6NEQ2 426 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 HMX3A6NHT5 357 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 ST8SIA3O43173 380 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 CNIH1O95406 144 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 MAS1LP35410 378 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 C10orf55Q5SWW7 151 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 Q6ZS46 218 aa16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 ZBTB8BQ8NAP8 495 aaPredicted RBP16.16■□□□□ 0.18
CDC42SE2-206ENST00000503291 TEX50A0A1B0GTY4 177 aa16.15■□□□□ 0.18
CDC42SE2-206ENST00000503291 NXPH3O95157 252 aa16.15■□□□□ 0.18
CDC42SE2-206ENST00000503291 COMPP49747 757 aaPredicted RBP16.15■□□□□ 0.18
CDC42SE2-206ENST00000503291 FXYD3Q14802 87 aa16.15■□□□□ 0.18
CDC42SE2-206ENST00000503291 CXorf66Q5JRM2 361 aaPredicted RBP16.15■□□□□ 0.18
CDC42SE2-206ENST00000503291 C9orf152Q5JTZ5 239 aa16.15■□□□□ 0.18
CDC42SE2-206ENST00000503291 NPFFR1Q9GZQ6 430 aa16.15■□□□□ 0.18
CDC42SE2-206ENST00000503291 E7EUB6 86 aa16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 TRIM77I1YAP6 450 aa16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 AARDQ4LEZ3 155 aa16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 OR4D5Q8NGN0 318 aa16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 WDR89Q96FK6 387 aaPredicted RBP16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 ZNF257Q9Y2Q1 563 aa16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 TET2Q6N021 2002 aaPredicted RBP16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 IFNA17P01571 189 aa16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 HSPE1P61604 102 aaKnown RBP16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 OR5B3Q8NH48 314 aa16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 CHAC2Q8WUX2 184 aa16.14■□□□□ 0.17
CDC42SE2-206ENST00000503291 LINC01548A6NM66 108 aa16.13■□□□□ 0.17
CDC42SE2-206ENST00000503291 BCAP31P51572 246 aa16.13■□□□□ 0.17
CDC42SE2-206ENST00000503291 NDPQ00604 133 aa16.13■□□□□ 0.17
CDC42SE2-206ENST00000503291 ZNF436Q9C0F3 470 aaPredicted RBP16.13■□□□□ 0.17
CDC42SE2-206ENST00000503291 IL15RAQ13261 267 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 OR1L8Q8NGR8 309 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 OR52E5Q8NH55 327 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 SRSF12Q8WXF0 261 aaKnown RBP16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 IGHG2P01859 326 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 RPL27AP46776 148 aaKnown RBP16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 CYCSP99999 105 aaKnown RBP16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 ID3Q02535 119 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 TNFRSF9Q07011 255 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 SPINK9Q5DT21 86 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 GRPEL2Q8TAA5 225 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 ARPC1AQ92747 370 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 FAM103A1Q9BTL3 118 aaKnown RBP16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 HINT2Q9BX68 163 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 NMES1Q9C002 83 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 PRSS22Q9GZN4 317 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 NDUFA4L2Q9NRX3 87 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 HSPB7Q9UBY9 170 aa16.12■□□□□ 0.17
CDC42SE2-206ENST00000503291 A0A1B0GW64 132 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 MSGN1A6NI15 193 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 CGB1A6NKQ9 187 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 SCGB1D2O95969 90 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 NKX2-1P43699 371 aaPredicted RBP16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 SPCS3P61009 180 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 SRSF4Q08170 494 aaKnown RBP16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 FYTTD1Q96QD9 318 aaKnown RBP16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 CRYBA1P05813 215 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 TRAPPC2P0DI81 140 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 TRAPPC2BP0DI82 140 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 RPL15P61313 204 aaKnown RBP16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 SRSF2Q01130 221 aaKnown RBP16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 SLC35E3Q7Z769 313 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 ABHD5Q8WTS1 349 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 TAF15Q92804 592 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 PARP11Q9NR21 331 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 CACFD1Q9UGQ2 172 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 FBXO7Q9Y3I1 522 aa16.11■□□□□ 0.17
CDC42SE2-206ENST00000503291 JMJD1CQ15652 2540 aa16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 FAM90A26D6RGX4 464 aa16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 ATP6V0E1O15342 81 aa16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 MBPP02686 304 aaPredicted RBP16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 EGR2P11161 476 aaPredicted RBP16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 PRCDQ00LT1 54 aa16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 CD83Q01151 205 aa16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 PDLIM3Q53GG5 364 aaPredicted RBP16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 OR10W1Q8NGF6 305 aa16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 MAGT1Q9H0U3 335 aa16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 ZNF702PQ9H963 129 aa16.1■□□□□ 0.17
CDC42SE2-206ENST00000503291 KCNAB3O43448 404 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms