RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 AP4M1O00189 453 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 TMPRSS2O15393 492 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 APOA2P02652 100 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 PPIAL4FP0DN26 164 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 SELLP14151 372 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 NDUFB7P17568 137 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 MEOX2P50222 304 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 CD81P60033 236 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 TLE1Q04724 770 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 TMEM241Q24JQ0 296 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 TCF23Q7RTU1 214 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 ZNF383Q8NA42 475 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 Q8NA96 180 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 NANPQ8TBE9 248 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 PPIAL4AQ9Y536 164 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 PRRC2CQ9Y520 2896 aaKnown RBP9.84□□□□□ -0.83
NUP54-202ENST00000502850 DIDO1Q9BTC0 2240 aaKnown RBP9.84□□□□□ -0.83
NUP54-202ENST00000502850 PRSS46E5RG02 174 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 F6UZH7 168 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 VENTXO95231 258 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 IGHV2-5P01817 119 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 S100A12P80511 92 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 HNF4GQ14541 408 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 LRRC10Q5BKY1 277 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 TREML4Q6UXN2 200 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 ZNF833PQ6ZTB9 187 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 C8orf31Q8N9H6 132 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 OSR1Q8TAX0 266 aaPredicted RBP9.84□□□□□ -0.83
NUP54-202ENST00000502850 Q8WTZ3 238 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 RND1Q92730 232 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 ZNF714Q96N38 554 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 C12orf57Q99622 126 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 PLEKHA3Q9HB20 300 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 SLC35D1Q9NTN3 355 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 OR51B2Q9Y5P1 312 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 SPTA1P02549 2419 aa9.84□□□□□ -0.83
NUP54-202ENST00000502850 TLN1Q9Y490 2541 aaKnown RBP9.84□□□□□ -0.83
NUP54-202ENST00000502850 NDUFB3O43676 98 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 MT-CO2P00403 227 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 THBDP07204 575 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 S100PP25815 95 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 GNG10P50151 68 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 RPL31P62899 125 aaKnown RBP9.83□□□□□ -0.84
NUP54-202ENST00000502850 CCL8P80075 99 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 PRCDQ00LT1 54 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 ZNF674Q2M3X9 581 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 TEPPQ6URK8 271 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 IQCF2Q8IXL9 164 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 VKORC1L1Q8N0U8 176 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 OR4F5Q8NH21 305 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 OR5B3Q8NH48 314 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 LEAP2Q969E1 77 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 ANAPC16Q96DE5 110 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 OR4F4Q96R69 305 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 GGTLC1Q9BX51 225 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 MS4A5Q9H3V2 200 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 BET1LQ9NYM9 111 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 PXMP4Q9Y6I8 212 aa9.83□□□□□ -0.84
NUP54-202ENST00000502850 TRBV24-1A0A075B6N3 115 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 TMEM178BH3BS89 294 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 UPK2O00526 184 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 RRHO14718 337 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 CXorf1O96002 111 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 IGHV3-7P01780 117 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 CASP6P55212 293 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 FABP9Q0Z7S8 132 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 KIAA0141Q14154 515 aaPredicted RBP9.82□□□□□ -0.84
NUP54-202ENST00000502850 BSXQ3C1V8 233 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 DUX4L9Q6RFH8 374 aaPredicted RBP9.82□□□□□ -0.84
NUP54-202ENST00000502850 C22orf34Q6ZV56 151 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 Q8N7P7 452 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 OR4A5Q8NH83 315 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 BTF3L4Q96K17 158 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 OR5B12Q96R08 314 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 VKORC1Q9BQB6 163 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 TMEM204Q9BSN7 226 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 PARLQ9H300 379 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 DYNLRB1Q9NP97 96 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 BOD1L1Q8NFC6 3051 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 DOCK11Q5JSL3 2073 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 TRAV3A0A0B4J244 114 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 A0A1W2PPE3 182 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 C11orf94C9JXX5 98 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 IL6RP08887 468 aaPredicted RBP9.82□□□□□ -0.84
NUP54-202ENST00000502850 ERVFRD-1P60508 538 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 RPS16P62249 146 aaKnown RBP9.82□□□□□ -0.84
NUP54-202ENST00000502850 RHOBP62745 196 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 ADIRFQ15847 76 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 LINC00311Q8N616 119 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 VSTM2AQ8TAG5 236 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 RPUSD4Q96CM3 377 aaKnown RBP9.82□□□□□ -0.84
NUP54-202ENST00000502850 FAM210BQ96KR6 192 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 MGST2Q99735 147 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 TMEM106BQ9NUM4 274 aa9.82□□□□□ -0.84
NUP54-202ENST00000502850 LSM4Q9Y4Z0 139 aaKnown RBP9.82□□□□□ -0.84
NUP54-202ENST00000502850 J3QR06 171 aa9.81□□□□□ -0.84
NUP54-202ENST00000502850 PAGE4O60829 102 aa9.81□□□□□ -0.84
NUP54-202ENST00000502850 EIF3GO75821 320 aaKnown RBP eCLIP9.81□□□□□ -0.84
NUP54-202ENST00000502850 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
NUP54-202ENST00000502850 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms