RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 IFNA21P01568 189 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 COMPP49747 757 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-222ENST00000496567 IZUMO4Q1ZYL8 232 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 UXS1Q8NBZ7 420 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 ABHD5Q8WTS1 349 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 TAF15Q92804 592 aaKnown RBP eCLIP17.19■□□□□ 0.34
C9orf3-222ENST00000496567 PARP11Q9NR21 331 aa17.19■□□□□ 0.34
C9orf3-222ENST00000496567 DBX1A6NMT0 343 aa17.18■□□□□ 0.34
C9orf3-222ENST00000496567 SSBP2P81877 361 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-222ENST00000496567 TMEM14BQ9NUH8 114 aa17.18■□□□□ 0.34
C9orf3-222ENST00000496567 FOXA2Q9Y261 457 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-222ENST00000496567 A0A1B0GU03 582 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 C7orf66A4D0T2 115 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 LINC01548A6NM66 108 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 IGF1P05019 195 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 SULT1A3P0DMM9 295 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 SULT1A4P0DMN0 295 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 RPL27AP46776 148 aaKnown RBP17.17■□□□□ 0.34
C9orf3-222ENST00000496567 OR2B8PP59922 312 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 NDPQ00604 133 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 GGNBP1Q5YKI7 109 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 ZNF429Q86V71 674 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 LINC01006Q8NI28 216 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 GRPEL2Q8TAA5 225 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 SRSF12Q8WXF0 261 aaKnown RBP17.17■□□□□ 0.34
C9orf3-222ENST00000496567 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-222ENST00000496567 COA4Q9NYJ1 87 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 CACNG5Q9UF02 275 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 OR51B2Q9Y5P1 312 aa17.17■□□□□ 0.34
C9orf3-222ENST00000496567 A0A1B0GUS0 222 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 ATP6V0E1O15342 81 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 ADAP1O75689 374 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 SLC25A6P12236 298 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 RIPPLY3P57055 190 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 FOXL1Q12952 345 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 SMCO1Q147U7 214 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 THOC7Q6I9Y2 204 aaKnown RBP17.16■□□□□ 0.34
C9orf3-222ENST00000496567 Q6ZRM9 215 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 OR1L8Q8NGR8 309 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 OR5B3Q8NH48 314 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 SGMS2Q8NHU3 365 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 SPIN2AQ99865 258 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 SPIN2BQ9BPZ2 258 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 CACFD1Q9UGQ2 172 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 ZNF580Q9UK33 172 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 ZNF257Q9Y2Q1 563 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 TNCP24821 2201 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 PLXNB1O43157 2135 aa17.16■□□□□ 0.34
C9orf3-222ENST00000496567 CRIP2P52943 208 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-222ENST00000496567 TMEM267Q0VDI3 215 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-222ENST00000496567 TMEM95Q3KNT9 176 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 KRTAP24-1Q3LI83 254 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 TMEM158Q8WZ71 300 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 PDCD10Q9BUL8 212 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 GON7Q9BXV9 100 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 SERTAD4Q9NUC0 356 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 TEX50A0A1B0GTY4 177 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 CLPSL1A2RUU4 121 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 MSGN1A6NI15 193 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 OPN1MWP04001 364 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 OPN1MW2P0DN77 364 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 OPN1MW3P0DN78 364 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 C10orf55Q5SWW7 151 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 STPG2Q8N412 459 aa17.15■□□□□ 0.34
C9orf3-222ENST00000496567 FAM103A1Q9BTL3 118 aaKnown RBP17.15■□□□□ 0.34
C9orf3-222ENST00000496567 SSNA1O43805 119 aa17.14■□□□□ 0.33
C9orf3-222ENST00000496567 EGR2P11161 476 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-222ENST00000496567 HSPE1P61604 102 aaKnown RBP17.14■□□□□ 0.33
C9orf3-222ENST00000496567 AARDQ4LEZ3 155 aa17.14■□□□□ 0.33
C9orf3-222ENST00000496567 AKIRIN2Q53H80 203 aa17.14■□□□□ 0.33
C9orf3-222ENST00000496567 TMEM68Q96MH6 324 aa17.14■□□□□ 0.33
C9orf3-222ENST00000496567 NOL4LQ96MY1 436 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-222ENST00000496567 FYTTD1Q96QD9 318 aaKnown RBP17.14■□□□□ 0.33
C9orf3-222ENST00000496567 QTRT1Q9BXR0 403 aaKnown RBP17.14■□□□□ 0.33
C9orf3-222ENST00000496567 FBXO7Q9Y3I1 522 aa17.14■□□□□ 0.33
C9orf3-222ENST00000496567 TMEM89A2RUT3 159 aa17.13■□□□□ 0.33
C9orf3-222ENST00000496567 TRAPPC2P0DI81 140 aa17.13■□□□□ 0.33
C9orf3-222ENST00000496567 TRAPPC2BP0DI82 140 aa17.13■□□□□ 0.33
C9orf3-222ENST00000496567 MYOD1P15172 320 aa17.13■□□□□ 0.33
C9orf3-222ENST00000496567 OR1S1Q8NH92 325 aa17.13■□□□□ 0.33
C9orf3-222ENST00000496567 NDUFA4L2Q9NRX3 87 aa17.13■□□□□ 0.33
C9orf3-222ENST00000496567 LINC00527Q9UJ94 153 aa17.13■□□□□ 0.33
C9orf3-222ENST00000496567 RNF114Q9Y508 228 aa17.13■□□□□ 0.33
C9orf3-222ENST00000496567 TRAV41A0A0B4J266 112 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 E7EUB6 86 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 ST8SIA3O43173 380 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 IFNA17P01571 189 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 MDKP21741 143 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-222ENST00000496567 ECSCRQ19T08 205 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 UNQ5815/PRO19632Q6UWF5 114 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 LFNGQ8NES3 379 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 OR52E5Q8NH55 327 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 SRSF8Q9BRL6 282 aaKnown RBP17.12■□□□□ 0.33
C9orf3-222ENST00000496567 C19orf24Q9BVV8 132 aa17.12■□□□□ 0.33
C9orf3-222ENST00000496567 SLC35B1P78383 322 aa17.11■□□□□ 0.33
C9orf3-222ENST00000496567 HSD17B13Q7Z5P4 300 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-222ENST00000496567 HINT2Q9BX68 163 aa17.11■□□□□ 0.33
C9orf3-222ENST00000496567 WNT10AQ9GZT5 417 aa17.11■□□□□ 0.33
C9orf3-222ENST00000496567 WSB1Q9Y6I7 421 aa17.11■□□□□ 0.33
C9orf3-222ENST00000496567 MPTX1A8MV57 137 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms