RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 C15orf61A6NNL5 157 aa17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 RNASE1P07998 156 aaKnown RBP17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 MYOD1P15172 320 aa17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 UBA52P62987 128 aaKnown RBP17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 CX3CL1P78423 397 aa17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 THOC7Q6I9Y2 204 aaKnown RBP17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 ZNF429Q86V71 674 aa17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 FOXRED2Q8IWF2 684 aa17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 SPIN2AQ99865 258 aa17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 SPIN2BQ9BPZ2 258 aa17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 QTRT1Q9BXR0 403 aaKnown RBP17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 FOXA2Q9Y261 457 aaPredicted RBP17.27■□□□□ 0.35
ECHDC3-205ENST00000496136 IGHV7-81A0A0B4J1V7 117 aa17.26■□□□□ 0.35
ECHDC3-205ENST00000496136 TNXAQ16473 311 aa17.26■□□□□ 0.35
ECHDC3-205ENST00000496136 Q6ZS46 218 aa17.26■□□□□ 0.35
ECHDC3-205ENST00000496136 C2orf50Q96LR7 162 aa17.26■□□□□ 0.35
ECHDC3-205ENST00000496136 HSPB9Q9BQS6 159 aa17.26■□□□□ 0.35
ECHDC3-205ENST00000496136 FKBP11Q9NYL4 201 aa17.26■□□□□ 0.35
ECHDC3-205ENST00000496136 GSKIPQ9P0R6 139 aa17.26■□□□□ 0.35
ECHDC3-205ENST00000496136 E7EUB6 86 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 ACTL6BO94805 426 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 OPN1MWP04001 364 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 OPN1MW2P0DN77 364 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 OPN1MW3P0DN78 364 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 MAS1LP35410 378 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 GNB1P62873 340 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 AARDQ4LEZ3 155 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 OR1S1Q8NH92 325 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 COMMD5Q9GZQ3 224 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 OR51B2Q9Y5P1 312 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 TEX50A0A1B0GTY4 177 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 HMX3A6NHT5 357 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 LINC01548A6NM66 108 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 ST8SIA3O43173 380 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 CNIH1O95406 144 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 COMPP49747 757 aaPredicted RBP17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 FXYD3Q14802 87 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 C10orf55Q5SWW7 151 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 ZBTB8BQ8NAP8 495 aaPredicted RBP17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 ZNF257Q9Y2Q1 563 aa17.25■□□□□ 0.35
ECHDC3-205ENST00000496136 TRIM77I1YAP6 450 aa17.24■□□□□ 0.35
ECHDC3-205ENST00000496136 CXorf66Q5JRM2 361 aaPredicted RBP17.24■□□□□ 0.35
ECHDC3-205ENST00000496136 OR4D5Q8NGN0 318 aa17.24■□□□□ 0.35
ECHDC3-205ENST00000496136 WDR89Q96FK6 387 aaPredicted RBP17.24■□□□□ 0.35
ECHDC3-205ENST00000496136 NPFFR1Q9GZQ6 430 aa17.24■□□□□ 0.35
ECHDC3-205ENST00000496136 NXPH3O95157 252 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 HSPE1P61604 102 aaKnown RBP17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 IL15RAQ13261 267 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 C9orf152Q5JTZ5 239 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 OR5B3Q8NH48 314 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 PDCD10Q9BUL8 212 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 C2CD3Q4AC94 2353 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 IGHG2P01859 326 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 NDPQ00604 133 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 OR1L8Q8NGR8 309 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 OR52E5Q8NH55 327 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 CHAC2Q8WUX2 184 aa17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 SRSF12Q8WXF0 261 aaKnown RBP17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 SETD2Q9BYW2 2564 aaPredicted RBP17.23■□□□□ 0.35
ECHDC3-205ENST00000496136 A0A1B0GW64 132 aa17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 CGB1A6NKQ9 187 aa17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 IFNA17P01571 189 aa17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 BCAP31P51572 246 aa17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 RPL15P61313 204 aaKnown RBP17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 ID3Q02535 119 aa17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 ZNF436Q9C0F3 470 aaPredicted RBP17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 PRSS22Q9GZN4 317 aa17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 NDUFA4L2Q9NRX3 87 aa17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 HSPB7Q9UBY9 170 aa17.22■□□□□ 0.35
ECHDC3-205ENST00000496136 MSGN1A6NI15 193 aa17.21■□□□□ 0.35
ECHDC3-205ENST00000496136 RPL27AP46776 148 aaKnown RBP17.21■□□□□ 0.35
ECHDC3-205ENST00000496136 CYCSP99999 105 aaKnown RBP17.21■□□□□ 0.35
ECHDC3-205ENST00000496136 TNFRSF9Q07011 255 aa17.21■□□□□ 0.35
ECHDC3-205ENST00000496136 SRSF4Q08170 494 aaKnown RBP17.21■□□□□ 0.35
ECHDC3-205ENST00000496136 ARPC1AQ92747 370 aa17.21■□□□□ 0.35
ECHDC3-205ENST00000496136 FAM103A1Q9BTL3 118 aaKnown RBP17.21■□□□□ 0.35
ECHDC3-205ENST00000496136 NMES1Q9C002 83 aa17.21■□□□□ 0.35
ECHDC3-205ENST00000496136 EGR2P11161 476 aaPredicted RBP17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 NKX2-1P43699 371 aaPredicted RBP17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 SPCS3P61009 180 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 SRSF2Q01130 221 aaKnown RBP17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 PDLIM3Q53GG5 364 aaPredicted RBP17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 GRPEL2Q8TAA5 225 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 TAF15Q92804 592 aaKnown RBP eCLIP17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 HINT2Q9BX68 163 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 ZNF702PQ9H963 129 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 CACFD1Q9UGQ2 172 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 FBXO7Q9Y3I1 522 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 FAM90A26D6RGX4 464 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 MBPP02686 304 aaPredicted RBP17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 CRYBA1P05813 215 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 SPINK9Q5DT21 86 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 SLC35E3Q7Z769 313 aa17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 FYTTD1Q96QD9 318 aaKnown RBP17.2■□□□□ 0.34
ECHDC3-205ENST00000496136 ATP6V0E1O15342 81 aa17.19■□□□□ 0.34
ECHDC3-205ENST00000496136 TRAPPC2P0DI81 140 aa17.19■□□□□ 0.34
ECHDC3-205ENST00000496136 TRAPPC2BP0DI82 140 aa17.19■□□□□ 0.34
ECHDC3-205ENST00000496136 PRCDQ00LT1 54 aa17.19■□□□□ 0.34
ECHDC3-205ENST00000496136 OR10W1Q8NGF6 305 aa17.19■□□□□ 0.34
ECHDC3-205ENST00000496136 MAGT1Q9H0U3 335 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms