RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 IZUMO1RA6ND01 250 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 S1PR2O95136 353 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 OR2C1O95371 312 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 APOA1P02647 267 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 PMP2P02689 132 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 EIF4EP06730 217 aaKnown RBP5.47□□□□□ -1.53
VPS52-221ENST00000495755 FGF2P09038 288 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 NQO2P16083 231 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 TAS2R46P59540 309 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 HERV-K104P61576 105 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 VBP1P61758 197 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 NCS1P62166 190 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 AADACL3Q5VUY0 350 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 GPHB5Q86YW7 130 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 SGPP2Q8IWX5 399 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 CADM3Q8N126 398 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 Q8N402 240 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 OR2K2Q8NGT1 345 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 OR51H1Q8NH63 302 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 CD300LFQ8TDQ1 290 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 GPX8Q8TED1 209 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 BORCS5Q969J3 196 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 CCDC140Q96MF4 163 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 RCHY1Q96PM5 261 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 ZNF2Q9BSG1 426 aaPredicted RBP5.47□□□□□ -1.53
VPS52-221ENST00000495755 HRASLSQ9HDD0 168 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 TMEM140Q9NV12 185 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 COMMD3Q9UBI1 195 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 PEMTQ9UBM1 199 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 TEX50A0A1B0GTY4 177 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 PPP5D1E7EU14 171 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 LGALS9O00182 355 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 GGCTO75223 188 aaKnown RBP5.46□□□□□ -1.54
VPS52-221ENST00000495755 DHFRP00374 187 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 IGHV3-23P01764 117 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 HLA-AP01891 365 aaKnown RBP5.46□□□□□ -1.54
VPS52-221ENST00000495755 RLN1P04808 185 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 REG1AP05451 166 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 SMIM18P0DKX4 95 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 FOLR2P14207 255 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 HIST1H1BP16401 226 aaKnown RBP5.46□□□□□ -1.54
VPS52-221ENST00000495755 ELK1P19419 428 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 F2RP25116 425 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 HLA-DMAP28067 261 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 HRH1P35367 487 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 DEFB114Q30KQ6 69 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 ZNF585BQ52M93 769 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 LCN12Q6JVE5 192 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 OR5H2Q8NGV7 314 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 OR6F1Q8NGZ6 308 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 DGCR14Q96DF8 476 aaKnown RBP5.46□□□□□ -1.54
VPS52-221ENST00000495755 SRSF8Q9BRL6 282 aaKnown RBP5.46□□□□□ -1.54
VPS52-221ENST00000495755 TM2D3Q9BRN9 247 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 QTRT1Q9BXR0 403 aaKnown RBP5.46□□□□□ -1.54
VPS52-221ENST00000495755 FXYD6Q9H0Q3 95 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 SCPEP1Q9HB40 452 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 COMMD9Q9P000 198 aa5.46□□□□□ -1.54
VPS52-221ENST00000495755 CSMD3Q7Z407 3707 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 TRBV7-1A0A0A6YYK4 115 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 SMIM31A0A1B0GVY4 71 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 MFSD2BA6NFX1 497 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 C2orf70A6NJV1 201 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 MARCH11A6NNE9 402 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 ZNF785A8K8V0 405 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 C3orf84H3BNL1 204 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 GPR31O00270 319 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 HPGDSO60760 199 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 CLEC3BP05452 202 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 TRAPPC2P0DI81 140 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 TRAPPC2BP0DI82 140 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 DEFA4P12838 97 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 RPA2P15927 270 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 EDN2P20800 178 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 CBLN1P23435 193 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 PTBP1P26599 531 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS52-221ENST00000495755 ARL3P36405 182 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 LPAR6P43657 344 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 RORCP51449 518 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 WT1-ASQ06250 92 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 CTF1Q16619 201 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 CD300EQ496F6 205 aaPredicted RBP5.45□□□□□ -1.54
VPS52-221ENST00000495755 THOC7Q6I9Y2 204 aaKnown RBP5.45□□□□□ -1.54
VPS52-221ENST00000495755 CLEC19AQ6UXS0 136 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 LINC00322Q6ZN03 302 aaPredicted RBP5.45□□□□□ -1.54
VPS52-221ENST00000495755 CMTM1Q8IZ96 169 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 DMBX1Q8NFW5 382 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 OR10W1Q8NGF6 305 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 ZNF502Q8TBZ5 544 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 FCAMRQ8WWV6 532 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 EEF1AKMT3Q96AZ1 226 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 CXorf58Q96LI9 332 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 COMMD5Q9GZQ3 224 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 ZMAT4Q9H898 229 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 ZC4H2Q9NQZ6 224 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 NDUFA4L2Q9NRX3 87 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 S4R3C0 116 aa5.45□□□□□ -1.54
VPS52-221ENST00000495755 HYDINQ4G0P3 5121 aa5.44□□□□□ -1.54
VPS52-221ENST00000495755 TMEM213A2RRL7 107 aa5.44□□□□□ -1.54
VPS52-221ENST00000495755 A8MWP6 167 aa5.44□□□□□ -1.54
VPS52-221ENST00000495755 GABARAPO95166 117 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms