RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 PAX1P15863 534 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 BPIFB3P59826 476 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 NUTF2P61970 127 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 BTNL3Q6UXE8 466 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 FGFRL1Q8N441 504 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 LAMP3Q9UQV4 416 aa15.24■□□□□ 0.03
TSPAN4-212ENST00000494815 TRBV24-1A0A075B6N3 115 aa15.23■□□□□ 0.03
TSPAN4-212ENST00000494815 TSTD3H0UI37 97 aa15.23■□□□□ 0.03
TSPAN4-212ENST00000494815 ZNF134P52741 427 aa15.23■□□□□ 0.03
TSPAN4-212ENST00000494815 ZNF787Q6DD87 383 aa15.23■□□□□ 0.03
TSPAN4-212ENST00000494815 SLC25A24Q6NUK1 477 aa15.23■□□□□ 0.03
TSPAN4-212ENST00000494815 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-212ENST00000494815 PACRGQ96M98 296 aaPredicted RBP15.23■□□□□ 0.03
TSPAN4-212ENST00000494815 RAB1BQ9H0U4 201 aa15.23■□□□□ 0.03
TSPAN4-212ENST00000494815 ZFP92A6NM28 416 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 RAMP3O60896 148 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 LYPD2Q6UXB3 125 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 OR5R1Q8NH85 324 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 SDF2L1Q9HCN8 221 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 RPUSD1Q9UJJ7 312 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 LINC00473A8K010 186 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 C17orf98A8MV24 154 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 PROP1O75360 226 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 FCN3O75636 299 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 OPN1MWP04001 364 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 OPN1MW2P0DN77 364 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 OPN1MW3P0DN78 364 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 DUTP33316 252 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 BRWD1-AS2P59051 145 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 C11orf71Q6IPW1 123 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 ZNF295-AS1Q8N0V1 137 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 ZNF439Q8NDP4 499 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 MBD3L1Q8WWY6 194 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 P2RX4Q99571 388 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 RPRMQ9NS64 109 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 CACNG5Q9UF02 275 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 PITPNC1Q9UKF7 332 aa15.22■□□□□ 0.03
TSPAN4-212ENST00000494815 IGSF10Q6WRI0 2623 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 MARCH11A6NNE9 402 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 DVL1O14640 695 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 MBP02144 154 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 CT45A1Q5HYN5 189 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 Q6ZRM9 215 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 CT45A3Q8NHU0 189 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 ZNF714Q96N38 554 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 RAB40CQ96S21 281 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 HIST1H2BLQ99880 126 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 CTDSP1Q9GZU7 261 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 CTSZQ9UBR2 303 aa15.21■□□□□ 0.03
TSPAN4-212ENST00000494815 SMCO3A2RU48 225 aa15.21■□□□□ 0.02
TSPAN4-212ENST00000494815 H3BP45 60 aa15.21■□□□□ 0.02
TSPAN4-212ENST00000494815 RAB4AP20338 218 aa15.21■□□□□ 0.02
TSPAN4-212ENST00000494815 TMEM267Q0VDI3 215 aaPredicted RBP15.21■□□□□ 0.02
TSPAN4-212ENST00000494815 DTX2Q86UW9 622 aa15.21■□□□□ 0.02
TSPAN4-212ENST00000494815 KIAA1324LA8MWY0 1029 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 RAB29O14966 203 aa15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 P0C879 139 aa15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 COL8A2P25067 703 aa15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 MRPS11P82912 194 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 ZNF816Q0VGE8 651 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 TMEM200BQ69YZ2 307 aa15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 SCGB1C1Q8TD33 95 aa15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 PSMG3Q9BT73 122 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 RSG1Q9BU20 258 aa15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 CFAP46Q8IYW2 2715 aa15.2■□□□□ 0.02
TSPAN4-212ENST00000494815 M0R1X1 148 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 RBFOX2O43251 390 aaKnown RBP eCLIP15.19■□□□□ 0.022e-9■■■■■ 36.7
TSPAN4-212ENST00000494815 S1PR2O95136 353 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 ZNF726P1Q15940 193 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 PRAMEF5Q5TYX0 476 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 USP24Q9UPU5 2620 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 FAM90A26D6RGX4 464 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 IGHV3-7P01780 117 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 IZUMO4Q1ZYL8 232 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 NCR3LG1Q68D85 454 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 LCN15Q6UWW0 184 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 TMEM183AQ8IXX5 376 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 NEU4Q8WWR8 484 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 H1FXQ92522 213 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 LEAP2Q969E1 77 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 PRO1933Q9H354 126 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 VSIRQ9H7M9 311 aa15.19■□□□□ 0.02
TSPAN4-212ENST00000494815 MMP23AO75900 390 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 KRASP01116 189 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 KIR2DS2P43631 304 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 RPL39P5Q59GN2 51 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 UTF1Q5T230 341 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 SLC25A48Q6ZT89 311 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 VAX2Q9UIW0 290 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 LYNX1G3V0Z9 82 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 LYNX1P0DP58 116 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 IGFBP2P18065 325 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 G6PCP35575 357 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 SSX7Q7RTT5 188 aa15.18■□□□□ 0.02
TSPAN4-212ENST00000494815 SAA2-SAA4A0A096LPE2 208 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 SAA2P0DJI9 122 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 FGF8P55075 233 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 ZNF525Q8N782 197 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 RNASEH2CQ8TDP1 164 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 SRD5A3Q9H8P0 318 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms