RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 MPDU1O75352 247 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 OR4A8P0C604 315 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 ATP5G3P48201 142 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-209ENST00000494623 ZNF439Q8NDP4 499 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 OR13D1Q8NGV5 346 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 ZCCHC14Q8WYQ9 949 aaKnown RBP9.2□□□□□ -0.94
CHMP3-209ENST00000494623 GGACTQ9BVM4 153 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 NPVFQ9HCQ7 196 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 AURKAIP1Q9NWT8 199 aaPredicted RBP9.2□□□□□ -0.94
CHMP3-209ENST00000494623 ATMQ13315 3056 aa9.2□□□□□ -0.94
CHMP3-209ENST00000494623 TRBV24-1A0A075B6N3 115 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 ZNF729A6NN14 1252 aaPredicted RBP9.19□□□□□ -0.94
CHMP3-209ENST00000494623 S100A12P80511 92 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 GGTLC1Q9BX51 225 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 TP53TG5Q9Y2B4 290 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 OR51B2Q9Y5P1 312 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 PIEZO2Q9H5I5 2752 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 DYSFO75923 2080 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 CA2P00918 260 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 HRASP01112 189 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 FABP1P07148 127 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 PFN1P07737 140 aaKnown RBP9.19□□□□□ -0.94
CHMP3-209ENST00000494623 CT45A6P0DMU7 189 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 CT45A5P0DMU8 189 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 CT45A7P0DMV0 189 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 NPY1RP25929 384 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 S100A2P29034 98 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 GALR1P47211 349 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 ARSJQ5FYB0 599 aaPredicted RBP9.19□□□□□ -0.94
CHMP3-209ENST00000494623 SLC24A4Q8NFF2 622 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 NUP37Q8NFH4 326 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 ADTRPQ96IZ2 230 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 OR5B12Q96R08 314 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 TMEM204Q9BSN7 226 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 GSN-AS1Q9NRJ2 163 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 TMEM14BQ9NUH8 114 aa9.19□□□□□ -0.94
CHMP3-209ENST00000494623 ANKRD11Q6UB99 2663 aaPredicted RBP9.19□□□□□ -0.94
CHMP3-209ENST00000494623 TRGV8A0A0C4DH27 118 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 hADV38S2A0JD32 116 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 SOX15O60248 233 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 NDUFB4O95168 129 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 IGKV1-16P04430 117 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 ARL14EPLP0DKL9 152 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 COL8A2P25067 703 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 TMPRSS3P57727 454 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 GNB1P62873 340 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 BSPH1Q075Z2 132 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 ADIPOQQ15848 244 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 ZNF124Q15973 351 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 OR10A7Q8NGE5 316 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 RND1Q92730 232 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 C1orf159Q96HA4 380 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 ELOVL1Q9BW60 279 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 GPR61Q9BZJ8 451 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 MIOXQ9UGB7 285 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 RPUSD1Q9UJJ7 312 aaKnown RBP9.18□□□□□ -0.94
CHMP3-209ENST00000494623 FOXA2Q9Y261 457 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-209ENST00000494623 ZGRF1Q86YA3 2104 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 RAI1Q7Z5J4 1906 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-209ENST00000494623 TRAV20A0A0B4J274 112 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 SRRM4A7MD48 611 aaKnown RBP9.18□□□□□ -0.94
CHMP3-209ENST00000494623 J3QR06 171 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 PPP1R2P9O14990 202 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 SOD3P08294 240 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 TNFRSF1AP19438 455 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 S100PP25815 95 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 TEX36Q5VZQ5 186 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 GFRALQ6UXV0 394 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 SLC35D1Q9NTN3 355 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 GAR1Q9NY12 217 aaKnown RBP9.18□□□□□ -0.94
CHMP3-209ENST00000494623 SLC25A10Q9UBX3 287 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-209ENST00000494623 PTPRZ1P23471 2315 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-209ENST00000494623 PCNX1Q96RV3 2341 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 ACACAQ13085 2346 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 C17orf100A8MU93 164 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 IL6RP08887 468 aaPredicted RBP9.18□□□□□ -0.94
CHMP3-209ENST00000494623 CHRNA7P36544 502 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 TEPPQ6URK8 271 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 CORO2AQ92828 525 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 RAB1CQ92928 201 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 DERL1Q9BUN8 251 aa9.18□□□□□ -0.94
CHMP3-209ENST00000494623 A0A1W2PPQ1 181 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 TGOLN2O43493 480 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 THBDP07204 575 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 CCL3L1P16619 93 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 SLC25A48Q6ZT89 311 aaKnown RBP9.17□□□□□ -0.94
CHMP3-209ENST00000494623 OR10D4PQ8NGN7 298 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 CCL17Q92583 94 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 FAM122AQ96E09 287 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 PCGF1Q9BSM1 259 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 LSM4Q9Y4Z0 139 aaKnown RBP9.17□□□□□ -0.94
CHMP3-209ENST00000494623 DSCAML1Q8TD84 2053 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 DMXL2Q8TDJ6 3036 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 PGPEP1LA6NFU8 196 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 NKX6-3A6NJ46 265 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 PDE6DO43924 150 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 STAG3L2P0CL84 134 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 TDGF1P3P51864 188 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms