RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 C10orf55Q5SWW7 151 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 STEAP1BQ6NZ63 245 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 LPCAT3Q6P1A2 487 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 CCDC190Q86UF4 302 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 C1QL4Q86Z23 238 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 MMD2Q8IY49 270 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 CADM3Q8N126 398 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 VSTM2AQ8TAG5 236 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 ABHD5Q8WTS1 349 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 CASTOR1Q8WTX7 329 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 TMEM68Q96MH6 324 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 OR2A7Q96R45 310 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 PLEKHA2Q9HB19 425 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 FAM212BQ9NTI7 297 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-217ENST00000494395 VSIG4Q9Y279 399 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-217ENST00000494395 NOTCH3Q9UM47 2321 aa6.79□□□□□ -1.32
ITGB1-217ENST00000494395 NOTCH1P46531 2555 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 ANKRD20A5PA0PJZ0 165 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 MSGN1A6NI15 193 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 TEX22C9J3V5 150 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 CREBL2O60519 120 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-217ENST00000494395 RBMXL2O75526 392 aaKnown RBP6.78□□□□□ -1.32
ITGB1-217ENST00000494395 CNIH1O95406 144 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 RAB3DO95716 219 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 HRASP01112 189 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 PTBP1P26599 531 aaKnown RBP eCLIP6.78□□□□□ -1.32
ITGB1-217ENST00000494395 MAS1LP35410 378 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 ZNF79Q15937 498 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 PHLDA2Q53GA4 152 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 OR4A47Q6IF82 309 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 FAAP20Q6NZ36 180 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 TMEM65Q6PI78 240 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 SSX9Q7RTT3 188 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 CMTM1Q8IZ96 169 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 SLC38A6Q8IZM9 456 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 POC5Q8NA72 575 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 ADAD2Q8NCV1 583 aaKnown RBP6.78□□□□□ -1.32
ITGB1-217ENST00000494395 OR4C16Q8NGL9 310 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 OR4A5Q8NH83 315 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 CD300LFQ8TDQ1 290 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 TRIM63Q969Q1 353 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 DGCR14Q96DF8 476 aaKnown RBP6.78□□□□□ -1.32
ITGB1-217ENST00000494395 SLC2A9Q9NRM0 540 aa6.78□□□□□ -1.32
ITGB1-217ENST00000494395 TRBV9A0A0B4J1U6 114 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 TRAV3A0A0B4J244 114 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 DPPA5A6NC42 116 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 FABP12A6NFH5 140 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 UPK2O00526 184 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 IGKV1-39P01597 117 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 IGKV1D-39P04432 117 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 IFNA6P05013 189 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 LGALS1P09382 135 aaKnown RBP6.77□□□□□ -1.33
ITGB1-217ENST00000494395 MYOD1P15172 320 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 IGLL1P15814 213 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 NQO2P16083 231 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 ETV6P41212 452 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 RPL8P62917 257 aaKnown RBP6.77□□□□□ -1.33
ITGB1-217ENST00000494395 DEFA6Q01524 100 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 KLK9Q2XQG4 91 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 TBC1D26Q86UD7 250 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 Q8N3U1 123 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 OR5T1Q8NG75 326 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 TERB2Q8NHR7 220 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 ZNF486Q96H40 463 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-217ENST00000494395 ALX4Q9H161 411 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-217ENST00000494395 SLA2Q9H6Q3 261 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 TMEM140Q9NV12 185 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 SLC2A8Q9NY64 477 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 KLK9Q9UKQ9 250 aa6.77□□□□□ -1.33
ITGB1-217ENST00000494395 HMX3A6NHT5 357 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 MARCH11A6NNE9 402 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 MPPED1O15442 326 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 TRGV3P03979 118 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 OR9G9P0C7N8 305 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 AKAIN1P0CW23 69 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 APELAP0DMC3 54 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 HLA-GP17693 338 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 PI3P19957 117 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 LPAR6P43657 344 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 RPL27AP46776 148 aaKnown RBP6.76□□□□□ -1.33
ITGB1-217ENST00000494395 PPP5CP53041 499 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 TPPP2P59282 170 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 DEFA5Q01523 94 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 ZNF45Q02386 682 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 ZNF616Q08AN1 781 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 MEF2DQ14814 521 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 TTC9CQ8N5M4 171 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 STPG3Q8N7X2 389 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 OR11H1Q8NG94 326 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 OR13C8Q8NGS7 320 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 MARCH1Q8TCQ1 289 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 SEC22AQ96IW7 307 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 MS4A10Q96PG2 267 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 OR5B12Q96R08 314 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 TP53RKQ96S44 253 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 SPIN2AQ99865 258 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 SPIN2BQ9BPZ2 258 aa6.76□□□□□ -1.33
ITGB1-217ENST00000494395 AIFM2Q9BRQ8 373 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms