RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 OR10S1Q8NGN2 331 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 TSSK2Q96PF2 358 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 FEVQ99581 238 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 GPR84Q9NQS5 396 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 HRNRQ86YZ3 2850 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF561-AS1K7EIQ3 104 aa9.69□□□□□ -0.86
BRCA1-222ENST00000493919 COX5AP20674 150 aa9.69□□□□□ -0.86
BRCA1-222ENST00000493919 CDKN2AP42771 156 aaKnown RBP9.69□□□□□ -0.86
BRCA1-222ENST00000493919 DAP3P51398 398 aaKnown RBP9.69□□□□□ -0.86
BRCA1-222ENST00000493919 YPEL3P61236 119 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-222ENST00000493919 TMEM97Q5BJF2 176 aa9.69□□□□□ -0.86
BRCA1-222ENST00000493919 TMEM123Q8N131 208 aa9.69□□□□□ -0.86
BRCA1-222ENST00000493919 IQCF1Q8N6M8 205 aa9.69□□□□□ -0.86
BRCA1-222ENST00000493919 FLYWCH2Q96CP2 140 aaKnown RBP9.69□□□□□ -0.86
BRCA1-222ENST00000493919 ZAR1LA6NP61 321 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 H7C1C5 153 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 SIRPB1O00241 398 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 HLA-AP01891 365 aaKnown RBP9.68□□□□□ -0.86
BRCA1-222ENST00000493919 GAPDHP04406 335 aaKnown RBP9.68□□□□□ -0.86
BRCA1-222ENST00000493919 B4GALT1P15291 398 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 EVI2AP22794 236 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 TCL1AP56279 114 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 CTXN1P60606 82 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 ROM1Q03395 351 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 ADIRFQ15847 76 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 CLEC12AQ5QGZ9 265 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 DPPA3Q6W0C5 159 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 PPP1R1CQ8WVI7 109 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 FCAMRQ8WWV6 532 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 SRSF8Q9BRL6 282 aaKnown RBP9.68□□□□□ -0.86
BRCA1-222ENST00000493919 C19orf24Q9BVV8 132 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 SERTAD4Q9NUC0 356 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 ABCA12Q86UK0 2595 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 NDUFB2O95178 105 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 SFT2D2O95562 160 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 IGHG1P01857 330 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 PRTN3P24158 256 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF133P52736 654 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-222ENST00000493919 CYCSP99999 105 aaKnown RBP9.68□□□□□ -0.86
BRCA1-222ENST00000493919 SFXN4Q6P4A7 337 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF433Q8N7K0 673 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-222ENST00000493919 OR4F17Q8NGA8 305 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 OR10G2Q8NGC3 310 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 OR4A16Q8NH70 328 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 ST6GALNAC6Q969X2 333 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 ADTRPQ96IZ2 230 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 OR4F4Q96R69 305 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 C1orf43Q9BWL3 253 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 HCAR1Q9BXC0 346 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 TMEM133Q9H2Q1 129 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 LRBAP50851 2863 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 CSMD1Q96PZ7 3565 aa9.68□□□□□ -0.86
BRCA1-222ENST00000493919 MSGN1A6NI15 193 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 DHHO43323 396 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 SOX14O95416 240 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 CYB5AP00167 134 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 HSPB1P04792 205 aaKnown RBP9.67□□□□□ -0.86
BRCA1-222ENST00000493919 CT45A10P0DMU9 189 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 LYL1P12980 280 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 HTR1DP28221 377 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 HMGA2P52926 109 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 SLC25A1P53007 311 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 TGFBR3Q03167 851 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 MFGE8Q08431 387 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-222ENST00000493919 FOXL1Q12952 345 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 FHL1Q13642 323 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 CEACAM16Q2WEN9 425 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 MIDNQ504T8 468 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 SLC25A30Q5SVS4 291 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 C22orf34Q6ZV56 151 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 DOK3Q7L591 496 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-222ENST00000493919 OSR2Q8N2R0 312 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF611Q8N823 705 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 OR6N2Q8NGY6 317 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 OR52N5Q8NH56 324 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 CMTM2Q8TAZ6 248 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 MBD6Q96DN6 1003 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 SLC25A44Q96H78 314 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-222ENST00000493919 AQP10Q96PS8 301 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 FGF20Q9NP95 211 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-222ENST00000493919 V9GYY9 64 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 ALPK2Q86TB3 2170 aa9.67□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF728P0DKX0 622 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 TIRAPP58753 221 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 RPL27P61353 136 aaKnown RBP9.66□□□□□ -0.86
BRCA1-222ENST00000493919 LCN6P62502 163 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 HLA-DRB3P79483 266 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 UBE2NLQ5JXB2 153 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 Q6ZWC4 215 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 CDC20BQ86Y33 519 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 LINC00471Q8N535 108 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 ZDHHC22Q8N966 263 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 C8orf31Q8N9H6 132 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF485Q8NCK3 441 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 SMIM19Q96E16 107 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 ZNF837Q96EG3 531 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-222ENST00000493919 AP1S3Q96PC3 154 aa9.66□□□□□ -0.86
BRCA1-222ENST00000493919 DUX3Q96PT4 197 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms