RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 TRAV25A0A0B4J276 109 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 LY6G6CO95867 125 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 C8orf88P0DMB2 117 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 GNG2P59768 71 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 PMS2P11Q13670 270 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 ZNF585BQ52M93 769 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 OR4A5Q8NH83 315 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 MARC2Q969Z3 335 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 BET1LQ9NYM9 111 aa12.95□□□□□ -0.34
COL9A1-210ENST00000493682 A0A0J9YWU9 116 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 NOTOA8MTQ0 251 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 TNFSF12O43508 249 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 GPR183P32249 361 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 OR2B8PP59922 312 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 EWSR1Q01844 656 aaKnown RBP eCLIP12.94□□□□□ -0.34
COL9A1-210ENST00000493682 TIMM50Q3ZCQ8 353 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 RBPMS2Q6ZRY4 209 aaKnown RBP12.94□□□□□ -0.34
COL9A1-210ENST00000493682 OR1L6Q8NGR2 347 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 ZNF502Q8TBZ5 544 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 HRASLSQ9HDD0 168 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 CCL28Q9NRJ3 127 aa12.94□□□□□ -0.34
COL9A1-210ENST00000493682 MRPL27Q9P0M9 148 aaKnown RBP12.94□□□□□ -0.34
COL9A1-210ENST00000493682 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 IGLC7A0M8Q6 106 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 SCGNO76038 276 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 SPAG16Q8N0X2 631 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 OR2C3Q8N628 320 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 SECTM1Q8WVN6 248 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 AIFM2Q9BRQ8 373 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 BLOC1S6Q9UL45 172 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 UFC1Q9Y3C8 167 aa12.93□□□□□ -0.34
COL9A1-210ENST00000493682 NUPR2A6NF83 97 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 PTHLHP12272 177 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 FCGR2CP31995 323 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 ELLP55199 621 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-210ENST00000493682 TNFRSF9Q07011 255 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 MSMO1Q15800 293 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 PLET1Q6UQ28 207 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 Q6ZWC4 215 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 LYG2Q86SG7 212 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 OR13F1Q8NGS4 319 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 CNBD2Q96M20 576 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 ZNF436Q9C0F3 470 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-210ENST00000493682 C5orf66Q9H5L9 145 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 TXNL4BQ9NX01 149 aaKnown RBP12.92□□□□□ -0.34
COL9A1-210ENST00000493682 DAPK2Q9UIK4 370 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
COL9A1-210ENST00000493682 TRAV3A0A0B4J244 114 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 SULT1C2O00338 296 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 RBFOX2O43251 390 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL9A1-210ENST00000493682 SPRY2O43597 315 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 PTBP1P26599 531 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL9A1-210ENST00000493682 FGF9P31371 208 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-210ENST00000493682 BMI1P35226 326 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 APOC4P55056 127 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 TAS2R31P59538 309 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 ARPC4P59998 168 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-210ENST00000493682 SLC38A6Q8IZM9 456 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 BEST4Q8NFU0 473 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 LGALS14Q8TCE9 139 aa12.91□□□□□ -0.34
COL9A1-210ENST00000493682 SPAG8Q99932 426 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-210ENST00000493682 UPK2O00526 184 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 PPYP01298 95 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 POU2AF1Q16633 256 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 TPRA1Q86W33 373 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 GVQW1Q8N7I0 195 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 ZBTB34Q8NCN2 500 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 TMEM190Q8WZ59 177 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
COL9A1-210ENST00000493682 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 SLC5A7Q9GZV3 580 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 RHBDL2Q9NX52 303 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 THYN1Q9P016 225 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 UBQLN2Q9UHD9 624 aa12.9□□□□□ -0.34
COL9A1-210ENST00000493682 UBE2CO00762 179 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 TSPAN4O14817 238 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 HPRT1P00492 218 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 NQO2P16083 231 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 SFXN4Q6P4A7 337 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 HOGA1Q86XE5 327 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 OR10W1Q8NGF6 305 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 VN1R17PQ8TDU5 208 aa12.89□□□□□ -0.35
COL9A1-210ENST00000493682 QTRT1Q9BXR0 403 aaKnown RBP12.89□□□□□ -0.35
COL9A1-210ENST00000493682 RRP15Q9Y3B9 282 aaKnown RBP12.89□□□□□ -0.35
COL9A1-210ENST00000493682 TGOLN2O43493 480 aa12.88□□□□□ -0.35
COL9A1-210ENST00000493682 RPA2P15927 270 aa12.88□□□□□ -0.35
COL9A1-210ENST00000493682 HSPA13P48723 471 aa12.88□□□□□ -0.35
COL9A1-210ENST00000493682 CATR1Q13166 79 aa12.88□□□□□ -0.35
COL9A1-210ENST00000493682 UBE2UQ5VVX9 321 aa12.88□□□□□ -0.35
COL9A1-210ENST00000493682 VCX3BQ9H321 246 aa12.88□□□□□ -0.35
COL9A1-210ENST00000493682 TMEM140Q9NV12 185 aa12.88□□□□□ -0.35
COL9A1-210ENST00000493682 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 KIR2DL5BA0A0G2JN68 375 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 KIR2DL5BA0A0G2JPC4 375 aa12.87□□□□□ -0.35
COL9A1-210ENST00000493682 OR2T8A6NH00 312 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms