RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PLA2R1Q13018 1463 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 RBBP6Q7Z6E9 1792 aaKnown RBP3.34□□□□□ -1.88
BRCA1-220ENST00000492859 ARHGAP5Q13017 1502 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 ANK1P16157 1881 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 NLRC5Q86WI3 1866 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 TRAV8-6A0A0B4J262 113 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 IGKV1D-13A0A0B4J2D9 117 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 TCRBV3S1A0A5B6 114 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 OR2T8A6NH00 312 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 PIRO00625 290 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 GSTZ1O43708 216 aaPredicted RBP3.34□□□□□ -1.88
BRCA1-220ENST00000492859 SS18L1O75177 396 aaPredicted RBP3.34□□□□□ -1.88
BRCA1-220ENST00000492859 SRSF10O75494 262 aaKnown RBP3.34□□□□□ -1.88
BRCA1-220ENST00000492859 SIX6O95475 246 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 IGKV1-13P0DP09 117 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 PSMB8P28062 276 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 NDUFA8P51970 172 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 RPS11P62280 158 aaKnown RBP eCLIP3.34□□□□□ -1.88
BRCA1-220ENST00000492859 ELOCQ15369 112 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 ACP7Q6ZNF0 438 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF571Q7Z3V5 609 aaPredicted RBP3.34□□□□□ -1.88
BRCA1-220ENST00000492859 ATOH7Q8N100 152 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 SLC22A24Q8N4F4 322 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 PRSS33Q8NF86 280 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 OR4K13Q8NH42 304 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 RTL8AQ9BWD3 113 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 C19orf25Q9UFG5 118 aaPredicted RBP3.34□□□□□ -1.88
BRCA1-220ENST00000492859 TPRKBQ9Y3C4 175 aa3.34□□□□□ -1.88
BRCA1-220ENST00000492859 ITSN2Q9NZM3 1697 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 SCN1AP35498 2009 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 PPLO60437 1756 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 DCCP43146 1447 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 SCN4AP35499 1836 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 PLEKHH2Q8IVE3 1493 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 CCDC88CQ9P219 2028 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 ABCA6Q8N139 1617 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 IZUMO1RA6ND01 250 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 RBMY1BA6NDE4 496 aaKnown RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 RBMY1EA6NEQ0 496 aaKnown RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 H0Y9J4 135 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 ISLRO14498 428 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 XKRYO14609 159 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 FFAR1O14842 300 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 AGPAT2O15120 278 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 TNFSF12O43508 249 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 NDUFS5O43920 106 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 LYZL6O75951 148 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 GABARAPO95166 117 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 RBMY1DP0C7P1 496 aaKnown RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 RBMY1A1P0DJD3 496 aaKnown RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 CR2P20023 1033 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 LMO1P25800 156 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 SRP14P37108 136 aaKnown RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 INSL3P51460 131 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 P2RX1P51575 399 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 YPEL3P61236 119 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 PPP1CAP62136 330 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 HMGN3Q15651 99 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 RTL8BQ17RB0 113 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 AMTNQ6UX39 209 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 Q6ZN92 141 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 DNM1P46Q6ZS02 220 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 VN1R4Q7Z5H5 301 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 RPS19BP1Q86WX3 136 aaKnown RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 OR4B1Q8NGF8 309 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 OR52P1PQ8NH57 321 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 OR1L3Q8NH93 324 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 OSR1Q8TAX0 266 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 NMNAT3Q96T66 252 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 AICDAQ9GZX7 198 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 SEC61A2Q9H9S3 476 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 CCDC167Q9P0B6 97 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 MARCOQ9UEW3 520 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 NOP16Q9Y3C1 178 aaKnown RBP3.33□□□□□ -1.88
BRCA1-220ENST00000492859 HEBP2Q9Y5Z4 205 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 STRCQ7RTU9 1775 aa3.33□□□□□ -1.88
BRCA1-220ENST00000492859 DOCK4Q8N1I0 1966 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 CUX1P39880 1505 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 LAMC1P11047 1609 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 RAPGEF6Q8TEU7 1601 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 IGHV2-26A0A0B4J1V2 119 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 A0A0J9YW62 118 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 M0R129 80 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 CD5LO43866 347 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 DEDDO75618 318 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 CRYGSP22914 178 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 PPIBP23284 216 aaKnown RBP3.32□□□□□ -1.88
BRCA1-220ENST00000492859 BTCP35070 178 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 SNCAP37840 140 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 CRISP3P54108 245 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 TMEM258P61165 79 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 Q0VG73 95 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 FOXI1Q12951 378 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 CST6Q15828 149 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 UBE2SQ16763 222 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 PAGE3Q5JUK9 113 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 OR2T2Q6IF00 324 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 RFLNAQ6ZTI6 216 aa3.32□□□□□ -1.88
BRCA1-220ENST00000492859 CLEC20AQ6ZU45 233 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms