RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 IGKV1D-17A0A075B6S4 117 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TRGV10A0A0A0MS01 117 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 C15orf62A8K5M9 175 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 AMBPP02760 352 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 BRWD1-AS2P59051 145 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 DPPA3Q6W0C5 159 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MBNL3Q9NUK0 354 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1B-203ENST00000492361 RAB29O14966 203 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 IGHV2-70P01814 119 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 DUTP33316 252 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 RPP30P78346 268 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TOMM20LQ6UXN7 152 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 OR10W1Q8NGF6 305 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ZMAT5Q9UDW3 170 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 SMG1Q96Q15 3661 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 FCN1O00602 326 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CA2P00918 260 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CRYBB3P26998 211 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 DDTP30046 118 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 KRTDAPP60985 99 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 RPL31P62899 125 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MSMPQ1L6U9 139 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CBLN4Q9NTU7 201 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 A0A1W2PRD5 423 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 A0A1W2PRF3 423 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 A0A1W2PRM7 423 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 PMCHP20382 165 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 NPPCP23582 126 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MORN2Q502X0 79 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 STUMQ69YW2 141 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 BLNKQ8WV28 456 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TMEM18Q96B42 140 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MS4A10Q96PG2 267 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 GP6Q9HCN6 339 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 DMRT1Q9Y5R6 373 aa12.6□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TMEM210A6NLX4 147 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 J3QR06 171 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CA1P00915 261 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CCL3L1P16619 93 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 ATP6V1FQ16864 119 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 SSBP3Q9BWW4 388 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 IL3RAP26951 378 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 CHRNB4P30926 498 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 GPX4P36969 197 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MIR17HGQ75NE6 70 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 GCSAMQ8N6F7 178 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 OR10G8Q8NGN5 311 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 PAM16Q9Y3D7 125 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 MMP23AO75900 390 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 C10orf55Q5SWW7 151 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 SLC35D1Q9NTN3 355 aa12.59□□□□□ -0.39
TNFRSF1B-203ENST00000492361 TRAV34A0A0B4J273 112 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 HPRT1P00492 218 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 PAX6P26367 422 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 OR10J1P30954 320 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 TREML4Q6UXN2 200 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 OR8I2Q8N0Y5 310 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 SLC24A4Q8NFF2 622 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 OCC1Q8TAD7 63 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 SRD5A3Q9H8P0 318 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 A0A1B0GW64 132 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 H0Y8G0 127 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 P2RX4Q99571 388 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 SPRY4Q9C004 299 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 MANBALQ9NQG1 85 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 PTPRQQ9UMZ3 2332 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 SAA2-SAA4A0A096LPE2 208 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 MGST3O14880 152 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 FRMD6-AS1P0C7T7 363 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 SAA2P0DJI9 122 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 NUBP1P53384 320 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 HCP5Q6MZN7 132 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 PQLC2Q6ZP29 291 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 CISD2Q8N5K1 135 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 OR10X1Q8NGY0 326 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 COMMD5Q9GZQ3 224 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 CTDSP1Q9GZU7 261 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 OR51B2Q9Y5P1 312 aa12.58□□□□□ -0.4
TNFRSF1B-203ENST00000492361 AKAP13Q12802 2813 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 PRR33A8MZF0 331 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 IGKV1-16P04430 117 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 HIST1H1BP16401 226 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 CNN1P51911 297 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 OR4A47Q6IF82 309 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 NAT8BQ9UHF3 227 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 A8MXE2 369 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 RBFOX2O43251 390 aaKnown RBP eCLIP12.57□□□□□ -0.44e-6■■■■■ 26.9
TNFRSF1B-203ENST00000492361 PROP1O75360 226 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 IL6RP08887 468 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 OR4A8P0C604 315 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 ORM2P19652 201 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 ACSF3Q4G176 576 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 RNASE7Q9H1E1 156 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 TUBG2Q9NRH3 451 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 ARHGAP32A7KAX9 2087 aa12.57□□□□□ -0.4
TNFRSF1B-203ENST00000492361 ELOA3CA0A087WX78 387 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms