RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NQO2P16083 231 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 EDN2P20800 178 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 PRSS3P35030 304 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 HERV-K104P61576 105 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 AADACL3Q5VUY0 350 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 SGPP2Q8IWX5 399 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 Q8N402 240 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 MOB3AQ96BX8 217 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 KCTD12Q96CX2 325 aaKnown RBP13.64□□□□□ -0.23
HMGN1-219ENST00000491183 CCDC140Q96MF4 163 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 TM2D3Q9BRN9 247 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 PLEKHA2Q9HB19 425 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 COMMD3Q9UBI1 195 aa13.64□□□□□ -0.23
HMGN1-219ENST00000491183 IGLV11-55A0A075B6I3 123 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 GGCTO75223 188 aaKnown RBP13.63□□□□□ -0.23
HMGN1-219ENST00000491183 VBP1P61758 197 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 FAM209BQ5JX69 171 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 OR5H2Q8NGV7 314 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 CD300LFQ8TDQ1 290 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 ZMAT4Q9H898 229 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 TMEM140Q9NV12 185 aa13.63□□□□□ -0.23
HMGN1-219ENST00000491183 IGLC7A0M8Q6 106 aa13.62□□□□□ -0.23
HMGN1-219ENST00000491183 ZNF785A8K8V0 405 aa13.62□□□□□ -0.23
HMGN1-219ENST00000491183 RPA2P15927 270 aa13.62□□□□□ -0.23
HMGN1-219ENST00000491183 TAS2R46P59540 309 aa13.62□□□□□ -0.23
HMGN1-219ENST00000491183 CD300EQ496F6 205 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-219ENST00000491183 GPX8Q8TED1 209 aa13.62□□□□□ -0.23
HMGN1-219ENST00000491183 BORCS5Q969J3 196 aa13.62□□□□□ -0.23
HMGN1-219ENST00000491183 FXYD6Q9H0Q3 95 aa13.62□□□□□ -0.23
HMGN1-219ENST00000491183 C2orf70A6NJV1 201 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 C3orf84H3BNL1 204 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 LGALS9O00182 355 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 DHFRP00374 187 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 APOA1P02647 267 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 RLN1P04808 185 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 HIST1H1BP16401 226 aaKnown RBP13.61□□□□□ -0.23
HMGN1-219ENST00000491183 F2RP25116 425 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 HLA-DMAP28067 261 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 ZNF585BQ52M93 769 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 GPHB5Q86YW7 130 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 DMBX1Q8NFW5 382 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 OR10W1Q8NGF6 305 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 OR2K2Q8NGT1 345 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 OR6F1Q8NGZ6 308 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 CMTM3Q96MX0 182 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 COMMD9Q9P000 198 aa13.61□□□□□ -0.23
HMGN1-219ENST00000491183 MFSD2BA6NFX1 497 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 DEFA4P12838 97 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 FOLR2P14207 255 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 ELK1P19419 428 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 HRH1P35367 487 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 ARL3P36405 182 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 LPAR6P43657 344 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 FCAMRQ8WWV6 532 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 DGCR14Q96DF8 476 aaKnown RBP13.6□□□□□ -0.23
HMGN1-219ENST00000491183 SRSF8Q9BRL6 282 aaKnown RBP13.6□□□□□ -0.23
HMGN1-219ENST00000491183 COMMD5Q9GZQ3 224 aa13.6□□□□□ -0.23
HMGN1-219ENST00000491183 TEX50A0A1B0GTY4 177 aa13.59□□□□□ -0.23
HMGN1-219ENST00000491183 HPGDSO60760 199 aa13.59□□□□□ -0.23
HMGN1-219ENST00000491183 FGF2P09038 288 aa13.59□□□□□ -0.23
HMGN1-219ENST00000491183 HAGHQ16775 308 aa13.59□□□□□ -0.23
HMGN1-219ENST00000491183 SNX29P2Q8IUI4 249 aa13.59□□□□□ -0.23
HMGN1-219ENST00000491183 MUC7Q8TAX7 377 aa13.59□□□□□ -0.23
HMGN1-219ENST00000491183 NAA50Q9GZZ1 169 aaKnown RBP13.59□□□□□ -0.23
HMGN1-219ENST00000491183 RYR3Q15413 4870 aa13.59□□□□□ -0.23
HMGN1-219ENST00000491183 SMIM31A0A1B0GVY4 71 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 MARCH11A6NNE9 402 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 GPR31O00270 319 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 KRASP01116 189 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 CLEC3BP05452 202 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 SMIM18P0DKX4 95 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 CBLN1P23435 193 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 WT1-ASQ06250 92 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 DYNLRB2Q8TF09 96 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 CACNG8Q8WXS5 425 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 CXorf58Q96LI9 332 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 QTRT1Q9BXR0 403 aaKnown RBP13.58□□□□□ -0.24
HMGN1-219ENST00000491183 SELENOKQ9Y6D0 94 aa13.58□□□□□ -0.24
HMGN1-219ENST00000491183 TRBV7-1A0A0A6YYK4 115 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 TMEM213A2RRL7 107 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 CD7P09564 240 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 TRAPPC2P0DI81 140 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 TRAPPC2BP0DI82 140 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 G6PCP35575 357 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 RORCP51449 518 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 ERVK-16P61578 105 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 PHLDA2Q53GA4 152 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 LINC00322Q6ZN03 302 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-219ENST00000491183 CMTM1Q8IZ96 169 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 CADM3Q8N126 398 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 ZNF502Q8TBZ5 544 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 CITED4Q96RK1 184 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 NEURL2Q9BR09 285 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 TUBA4BQ9H853 241 aa13.57□□□□□ -0.24
HMGN1-219ENST00000491183 SCPEP1Q9HB40 452 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms