RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 C22orf15Q8WYQ4 148 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 TAAR6Q96RI8 345 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 LY96Q9Y6Y9 160 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 AKAP13Q12802 2813 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 NKX6-3A6NJ46 265 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 C12orf77C9JDV5 145 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 FTH1P19P0C7X4 201 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 GDF1P27539 372 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 GCHFRP30047 84 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 ARR3P36575 388 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 PLP2Q04941 152 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 SCCPDHQ8NBX0 429 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 C11orf52Q96A22 123 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 GGTLC1Q9BX51 225 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 TUBG2Q9NRH3 451 aa16.07■□□□□ 0.16
SNAPC3-206ENST00000490969 TRGV10A0A0A0MS01 117 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 MT-ND6P03923 174 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 ZNF83P51522 516 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 KIAA1644Q3SXP7 199 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 TMEM164Q5U3C3 297 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 APH1AQ96BI3 265 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 TRAV34A0A0B4J273 112 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 NXPH2O95156 264 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 GFRA1P56159 465 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 LINC00205P59089 165 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 SRSF6Q13247 344 aaKnown RBP16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 WDR73Q6P4I2 378 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 TUSC5Q8IXB3 177 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 TCTEX1D1Q8N7M0 179 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 RTL8AQ9BWD3 113 aa16.06■□□□□ 0.16
SNAPC3-206ENST00000490969 LINC00473A8K010 186 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 SPINK4O60575 86 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 C3orf79P0CE67 100 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 ZNF146Q15072 292 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 SAPCD1Q5SSQ6 148 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 MS4A5Q9H3V2 200 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 SPENQ96T58 3664 aaKnown RBP16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 DPRXA6NFQ7 191 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 ZNF324O75467 553 aaPredicted RBP16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 PRRX1P54821 245 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 SRYQ05066 204 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 KLHDC1Q8N7A1 406 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 UHRF2Q96PU4 802 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 WNT10AQ9GZT5 417 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 POLDIP2Q9Y2S7 368 aa16.05■□□□□ 0.16
SNAPC3-206ENST00000490969 TMEM30CPA0ZSE6 113 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 OR9G9P0C7N8 305 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 CEBPDP49716 269 aaPredicted RBP16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 CLDN18P56856 261 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 CX3CL1P78423 397 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 RPL19P84098 196 aaKnown RBP16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 COTL1Q14019 142 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 TMEM136Q6ZRR5 245 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 NINJ1Q92982 152 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 FAM166BA8MTA8 275 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 PSPNO60542 156 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 HBZP02008 142 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 UBE2V1Q13404 147 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 NIT1Q86X76 327 aa16.04■□□□□ 0.16
SNAPC3-206ENST00000490969 PINLYPA6NC86 204 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 ITGB1BP1O14713 200 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 CDIPTO14735 213 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 TOMM40O96008 361 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 Q6ZVH6 145 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 WDR31Q8NA23 367 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 SSMEM1Q8WWF3 244 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 CACNA1DQ01668 2161 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 BOD1L1Q8NFC6 3051 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 IGHV3-64DA0A0J9YX35 117 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 REG1AP05451 166 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 TSPOP30536 169 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 RPP30P78346 268 aaKnown RBP16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 SPATA31B1PQ5VZV4 182 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 SPINK14Q6IE38 97 aa16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 COL25A1Q9BXS0 654 aaPredicted RBP16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 SEPSECSQ9HD40 501 aaKnown RBP16.03■□□□□ 0.16
SNAPC3-206ENST00000490969 HAND1O96004 215 aa16.02■□□□□ 0.16
SNAPC3-206ENST00000490969 HINT1P49773 126 aaPredicted RBP16.02■□□□□ 0.16
SNAPC3-206ENST00000490969 UNQ5815/PRO19632Q6UWF5 114 aa16.02■□□□□ 0.16
SNAPC3-206ENST00000490969 COX11Q9Y6N1 276 aa16.02■□□□□ 0.16
SNAPC3-206ENST00000490969 OOEPA6NGQ2 149 aa16.02■□□□□ 0.15
SNAPC3-206ENST00000490969 PRSS46E5RG02 174 aa16.02■□□□□ 0.15
SNAPC3-206ENST00000490969 K7EP13 123 aa16.02■□□□□ 0.15
SNAPC3-206ENST00000490969 SRIP30626 198 aa16.02■□□□□ 0.15
SNAPC3-206ENST00000490969 EFNB3Q15768 340 aa16.02■□□□□ 0.15
SNAPC3-206ENST00000490969 HES7Q9BYE0 225 aa16.02■□□□□ 0.15
SNAPC3-206ENST00000490969 MRPS16Q9Y3D3 137 aaKnown RBP16.02■□□□□ 0.15
SNAPC3-206ENST00000490969 PTPRBP23467 1997 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 MT-CO2P00403 227 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 OR10J4P0C629 311 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 COL8A2P25067 703 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 GNG4P50150 75 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 TMPRSS3P57727 454 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 SLC35B1P78383 322 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 COX19Q49B96 90 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 CENPWQ5EE01 88 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 FAM19A2Q8N3H0 131 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 ZNF738Q8NE65 137 aa16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 HEYLQ9NQ87 328 aaPredicted RBP16.01■□□□□ 0.15
SNAPC3-206ENST00000490969 DOCK7Q96N67 2140 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms