RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 OR5B3Q8NH48 314 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 RPEQ96AT9 228 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 HARBI1Q96MB7 349 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 RNF5Q99942 180 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 HEYLQ9NQ87 328 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-210ENST00000490808 INSIG2Q9Y5U4 225 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 KPTNQ9Y664 436 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
HDAC3-210ENST00000490808 IGHV4-30-2A0A087WSY4 118 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 RAB19A4D1S5 217 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 C15orf61A6NNL5 157 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 LEUTXA8MZ59 168 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 BUB1B-PAK6H3BSN5 160 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 UPK2O00526 184 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 FCN3O75636 299 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 TSPAN9O75954 239 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 KBTBD11O94819 623 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 IFNA10P01566 189 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 PRH1P02810 166 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 OR9G9P0C7N8 305 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 PRTN3P24158 256 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-210ENST00000490808 F2RL1P55085 397 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 RELBQ01201 579 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 CLINT1Q14677 625 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 AKR1C8PQ5T2L2 129 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 OR4A47Q6IF82 309 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 TMEM14EPQ6UXP3 125 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 IL34Q6ZMJ4 242 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 EIF4E3Q8N5X7 224 aaKnown RBP8.34□□□□□ -1.07
HDAC3-210ENST00000490808 TEX29Q8N6K0 151 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 TMEM217Q8N7C4 229 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 ST6GALNAC6Q969X2 333 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 MARC2Q969Z3 335 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 C1orf159Q96HA4 380 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 NABP2Q9BQ15 211 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 QTRT1Q9BXR0 403 aaKnown RBP8.34□□□□□ -1.07
HDAC3-210ENST00000490808 MRPL20Q9BYC9 149 aaKnown RBP8.34□□□□□ -1.07
HDAC3-210ENST00000490808 BPESC1Q9GZL8 116 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 PARP11Q9NR21 331 aa8.34□□□□□ -1.07
HDAC3-210ENST00000490808 A0A096LNT2 108 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 A0A1W2PN81 502 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 OOSP1A8MZH6 123 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 C17orf112F2Z3M2 114 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 H0YJW9 148 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 LY6HO94772 140 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 TMEM50AO95807 157 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 IGLV1-47P01700 117 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 IGHV2-5P01817 119 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 METTL15P1P0C7V9 234 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 GATA3P23771 443 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 HTR1DP28221 377 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 CHRNA7P36544 502 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 CAMLGP49069 296 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 LGALS4P56470 323 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 SERF2P84101 59 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 SLC38A11Q08AI6 406 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 TMEM267Q0VDI3 215 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-210ENST00000490808 FAM74A1Q5RGS3 127 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 CCDC144NLQ6NUI1 221 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 CLEC9AQ6UXN8 241 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 C11orf42Q8N5U0 333 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 ZNF709Q8N972 641 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 HSD17B11Q8NBQ5 300 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 LFNGQ8NES3 379 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 OR11H6Q8NGC7 330 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 OR2G3Q8NGZ4 309 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 PSMG3Q9BT73 122 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-210ENST00000490808 TMEM147Q9BVK8 224 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 GGACTQ9BVM4 153 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 COMMD5Q9GZQ3 224 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 MS4A7Q9GZW8 240 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-210ENST00000490808 PLEKHA3Q9HB20 300 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 TMEM14BQ9NUH8 114 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 FBXO7Q9Y3I1 522 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 OR51B2Q9Y5P1 312 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
HDAC3-210ENST00000490808 A8MXK9 166 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 B4DSR2 109 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 H3BP45 60 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 I3L521 148 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 MPDU1O75352 247 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 MBP02144 154 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 ARG1P05089 322 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 FAM157CP0CG43 387 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 MAS1LP35410 378 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 SUB1P53999 127 aaKnown RBP eCLIP8.32□□□□□ -1.08
HDAC3-210ENST00000490808 LINC00205P59089 165 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 OR2B8PP59922 312 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 ARF6P62330 175 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 ERHP84090 104 aaKnown RBP8.32□□□□□ -1.08
HDAC3-210ENST00000490808 AANATQ16613 207 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 TMEM249Q2WGJ8 235 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 MINOS1Q5TGZ0 78 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 OR8G2PQ6IF36 304 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 MOB3BQ86TA1 216 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 PNKDQ8N490 385 aa8.32□□□□□ -1.08
HDAC3-210ENST00000490808 TEX45Q8NA69 505 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms