RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ZNF430Q9H8G1 570 aaPredicted RBP8.72□□□□□ -1.01
VARS2-210ENST00000490699 COA4Q9NYJ1 87 aa8.72□□□□□ -1.01
VARS2-210ENST00000490699 FOXA2Q9Y261 457 aaPredicted RBP8.72□□□□□ -1.01
VARS2-210ENST00000490699 OR51B2Q9Y5P1 312 aa8.72□□□□□ -1.01
VARS2-210ENST00000490699 A0A1W2PN81 502 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 AP4M1O00189 453 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 CHST1O43916 411 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 ADAP1O75689 374 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 LY86O95711 162 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 PET100P0DJ07 73 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 CHRNA7P36544 502 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 HOXA1P49639 335 aaPredicted RBP8.71□□□□□ -1.02
VARS2-210ENST00000490699 OR2B8PP59922 312 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 RRAS2P62070 204 aaPredicted RBP8.71□□□□□ -1.02
VARS2-210ENST00000490699 FXYD3Q14802 87 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 NMSQ5H8A3 153 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 ZNF562Q6V9R5 426 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 HSD17B13Q7Z5P4 300 aaPredicted RBP8.71□□□□□ -1.02
VARS2-210ENST00000490699 OR5M8Q8NGP6 311 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 GRPEL2Q8TAA5 225 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 ASB13Q8WXK3 278 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 GPR146Q96CH1 333 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 FYTTD1Q96QD9 318 aaKnown RBP8.71□□□□□ -1.02
VARS2-210ENST00000490699 PLEKHA3Q9HB20 300 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 PARP11Q9NR21 331 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 PLSCR3Q9NRY6 295 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 GSKIPQ9P0R6 139 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 ZNF257Q9Y2Q1 563 aa8.71□□□□□ -1.02
VARS2-210ENST00000490699 DBX1A6NMT0 343 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 CEBPZOSA8MTT3 80 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 FAM90A26D6RGX4 464 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 SCGB1D2O95969 90 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 CRYGBP07316 175 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 OR9G9P0C7N8 305 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 TRAPPC2P0DI81 140 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 TRAPPC2BP0DI82 140 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 PVALBP20472 110 aaPredicted RBP8.7□□□□□ -1.02
VARS2-210ENST00000490699 VDAC2P45880 294 aaPredicted RBP8.7□□□□□ -1.02
VARS2-210ENST00000490699 COMPP49747 757 aaPredicted RBP8.7□□□□□ -1.02
VARS2-210ENST00000490699 SPCS3P61009 180 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 RELBQ01201 579 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 Q6ZNX1 250 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 ZNF429Q86V71 674 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 OR4F5Q8NH21 305 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 C2orf50Q96LR7 162 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 TMEM68Q96MH6 324 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 SRSF8Q9BRL6 282 aaKnown RBP8.7□□□□□ -1.02
VARS2-210ENST00000490699 QTRT1Q9BXR0 403 aaKnown RBP8.7□□□□□ -1.02
VARS2-210ENST00000490699 HIPK2Q9H2X6 1198 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 ESM1Q9NQ30 184 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 TPSG1Q9NRR2 321 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 TMEM14BQ9NUH8 114 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 NSG2Q9Y328 171 aa8.7□□□□□ -1.02
VARS2-210ENST00000490699 hCG_2014768A0A024R1R8 64 aa8.69□□□□□ -1.02
VARS2-210ENST00000490699 A0A0B4J293 547 aa8.69□□□□□ -1.02
VARS2-210ENST00000490699 CCSO14618 274 aa8.69□□□□□ -1.02
VARS2-210ENST00000490699 ST8SIA3O43173 380 aa8.69□□□□□ -1.02
VARS2-210ENST00000490699 RLN2P04090 185 aa8.69□□□□□ -1.02
VARS2-210ENST00000490699 NKX2-1P43699 371 aaPredicted RBP8.69□□□□□ -1.02
VARS2-210ENST00000490699 HSPE1P61604 102 aaKnown RBP8.69□□□□□ -1.02
VARS2-210ENST00000490699 RPP30P78346 268 aaKnown RBP8.69□□□□□ -1.02
VARS2-210ENST00000490699 SLC35B1P78383 322 aa8.69□□□□□ -1.02
VARS2-210ENST00000490699 CX3CL1P78423 397 aa8.69□□□□□ -1.02
VARS2-210ENST00000490699 ERHP84090 104 aaKnown RBP8.69□□□□□ -1.02
VARS2-210ENST00000490699 OR52E5Q8NH55 327 aa8.69□□□□□ -1.02
VARS2-210ENST00000490699 SRSF12Q8WXF0 261 aaKnown RBP8.69□□□□□ -1.02
VARS2-210ENST00000490699 CIB3Q96Q77 187 aaPredicted RBP8.69□□□□□ -1.02
VARS2-210ENST00000490699 NSD1Q96L73 2696 aaPredicted RBP8.68□□□□□ -1.02
VARS2-210ENST00000490699 IGHV7-81A0A0B4J1V7 117 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 TRAV3A0A0B4J244 114 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 L7N2F9 121 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 TSPAN9O75954 239 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 IGHG2P01859 326 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 OPN1MWP04001 364 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 P0C879 139 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 OPN1MW2P0DN77 364 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 OPN1MW3P0DN78 364 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 SNCAP37840 140 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 SUB1P53999 127 aaKnown RBP eCLIP8.68□□□□□ -1.028e-6■■■□□ 15.4
VARS2-210ENST00000490699 S100A10P60903 97 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 VAMP2P63027 116 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 TNFRSF9Q07011 255 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 PJVKQ0ZLH3 352 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 ECSCRQ19T08 205 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 IZUMO4Q1ZYL8 232 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 FBLN7Q53RD9 439 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 NOXA1Q86UR1 476 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 ZBTB8BQ8NAP8 495 aaPredicted RBP8.68□□□□□ -1.02
VARS2-210ENST00000490699 RBMXL1Q96E39 390 aaKnown RBP8.68□□□□□ -1.02
VARS2-210ENST00000490699 NMES1Q9C002 83 aa8.68□□□□□ -1.02
VARS2-210ENST00000490699 HEYLQ9NQ87 328 aaPredicted RBP8.68□□□□□ -1.02
VARS2-210ENST00000490699 TRAV41A0A0B4J266 112 aa8.67□□□□□ -1.02
VARS2-210ENST00000490699 A0A0G2JRQ6 117 aa8.67□□□□□ -1.02
VARS2-210ENST00000490699 TEX50A0A1B0GTY4 177 aa8.67□□□□□ -1.02
VARS2-210ENST00000490699 A0A1B0GUS0 222 aa8.67□□□□□ -1.02
VARS2-210ENST00000490699 HMX3A6NHT5 357 aa8.67□□□□□ -1.02
VARS2-210ENST00000490699 MSGN1A6NI15 193 aa8.67□□□□□ -1.02
VARS2-210ENST00000490699 FCN1O00602 326 aa8.67□□□□□ -1.02
VARS2-210ENST00000490699 ATP6V0E1O15342 81 aa8.67□□□□□ -1.02
VARS2-210ENST00000490699 NXPH3O95157 252 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms