RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PSMB6P28072 239 aa15.1■□□□□ 0.01
SMC4-222ENST00000490207 ERVK-16P61578 105 aa15.1■□□□□ 0.01
SMC4-222ENST00000490207 C15orf32Q32M92 178 aa15.1■□□□□ 0.01
SMC4-222ENST00000490207 RNASE12Q5GAN4 147 aaKnown RBP15.1■□□□□ 0.01
SMC4-222ENST00000490207 EXTL2Q9UBQ6 330 aa15.1■□□□□ 0.01
SMC4-222ENST00000490207 SMAD5-AS1Q9Y6J3 95 aa15.1■□□□□ 0.01
SMC4-222ENST00000490207 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.09■□□□□ 0.01
SMC4-222ENST00000490207 TRAV3A0A0B4J244 114 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 CGB1A6NKQ9 187 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 BMPR1BO00238 502 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 DHFRP00374 187 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 CRYGCP07315 174 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 RPA2P15927 270 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 CTRB1P17538 263 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 TATDN3Q17R31 274 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 FAM209BQ5JX69 171 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 CTRB2Q6GPI1 263 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 COMMD5Q9GZQ3 224 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 FBXL7Q9UJT9 491 aa15.09■□□□□ 0.01
SMC4-222ENST00000490207 MARCH11A6NNE9 402 aa15.08■□□□□ 0
SMC4-222ENST00000490207 REG1AP05451 166 aa15.08■□□□□ 0
SMC4-222ENST00000490207 OR2B8PP59922 312 aa15.08■□□□□ 0
SMC4-222ENST00000490207 DGCR14Q96DF8 476 aaKnown RBP15.08■□□□□ 0
SMC4-222ENST00000490207 FANCD2OSQ96PS1 177 aa15.08■□□□□ 0
SMC4-222ENST00000490207 FGF2P09038 288 aa15.07■□□□□ 0
SMC4-222ENST00000490207 NHLRC4P0CG21 123 aaPredicted RBP15.07■□□□□ 0
SMC4-222ENST00000490207 HIST1H1BP16401 226 aaKnown RBP15.07■□□□□ 0
SMC4-222ENST00000490207 S100GP29377 79 aa15.07■□□□□ 0
SMC4-222ENST00000490207 LPAR6P43657 344 aa15.07■□□□□ 0
SMC4-222ENST00000490207 PHLDA2Q53GA4 152 aa15.07■□□□□ 0
SMC4-222ENST00000490207 LPCAT3Q6P1A2 487 aa15.07■□□□□ 0
SMC4-222ENST00000490207 IL34Q6ZMJ4 242 aa15.07■□□□□ 0
SMC4-222ENST00000490207 FCAMRQ8WWV6 532 aa15.07■□□□□ 0
SMC4-222ENST00000490207 PEMTQ9UBM1 199 aa15.07■□□□□ 0
SMC4-222ENST00000490207 PPP5D1E7EU14 171 aa15.06■□□□□ 0
SMC4-222ENST00000490207 M0QYG6 137 aa15.06■□□□□ 0
SMC4-222ENST00000490207 DEFA4P12838 97 aa15.06■□□□□ 0
SMC4-222ENST00000490207 ASCL2Q99929 193 aa15.06■□□□□ 0
SMC4-222ENST00000490207 QTRT1Q9BXR0 403 aaKnown RBP15.06■□□□□ 0
SMC4-222ENST00000490207 IGLV11-55A0A075B6I3 123 aa15.05■□□□□ -0
SMC4-222ENST00000490207 IGLC7A0M8Q6 106 aa15.05■□□□□ -0
SMC4-222ENST00000490207 NDUFB8O95169 186 aa15.05■□□□□ -0
SMC4-222ENST00000490207 IGHV3-23P01764 117 aa15.05■□□□□ -0
SMC4-222ENST00000490207 CSN3P07498 182 aa15.05■□□□□ -0
SMC4-222ENST00000490207 SPCS2Q15005 226 aa15.05■□□□□ -0
SMC4-222ENST00000490207 KLK9Q2XQG4 91 aa15.05■□□□□ -0
SMC4-222ENST00000490207 ZNF585BQ52M93 769 aa15.05■□□□□ -0
SMC4-222ENST00000490207 THOC7Q6I9Y2 204 aaKnown RBP15.05■□□□□ -0
SMC4-222ENST00000490207 CLVS1Q8IUQ0 354 aaPredicted RBP15.05■□□□□ -0
SMC4-222ENST00000490207 SLC38A6Q8IZM9 456 aa15.05■□□□□ -0
SMC4-222ENST00000490207 OR52I2Q8NH67 350 aa15.05■□□□□ -0
SMC4-222ENST00000490207 EEF1AKMT3Q96AZ1 226 aa15.05■□□□□ -0
SMC4-222ENST00000490207 SRSF8Q9BRL6 282 aaKnown RBP15.05■□□□□ -0
SMC4-222ENST00000490207 KLK11Q9UBX7 282 aa15.05■□□□□ -0
SMC4-222ENST00000490207 KLK9Q9UKQ9 250 aa15.05■□□□□ -0
SMC4-222ENST00000490207 S4R3C0 116 aa15.05■□□□□ -0
SMC4-222ENST00000490207 RGS5O15539 181 aa15.04■□□□□ -0
SMC4-222ENST00000490207 KRASP01116 189 aa15.04■□□□□ -0
SMC4-222ENST00000490207 G6PCP35575 357 aa15.04■□□□□ -0
SMC4-222ENST00000490207 UCP3P55916 312 aa15.04■□□□□ -0
SMC4-222ENST00000490207 RNASE10Q5GAN6 216 aaKnown RBP15.04■□□□□ -0
SMC4-222ENST00000490207 TBC1D26Q86UD7 250 aa15.04■□□□□ -0
SMC4-222ENST00000490207 LAX1Q8IWV1 398 aa15.04■□□□□ -0
SMC4-222ENST00000490207 C15orf40Q8WUR7 153 aa15.04■□□□□ -0
SMC4-222ENST00000490207 CCDC140Q96MF4 163 aa15.04■□□□□ -0
SMC4-222ENST00000490207 MIXL1Q9H2W2 232 aa15.04■□□□□ -0
SMC4-222ENST00000490207 SIGLEC8Q9NYZ4 499 aa15.04■□□□□ -0
SMC4-222ENST00000490207 H0Y980 276 aa15.03■□□□□ -0
SMC4-222ENST00000490207 GGCTO75223 188 aaKnown RBP15.03■□□□□ -0
SMC4-222ENST00000490207 TPPPO94811 219 aa15.03■□□□□ -0
SMC4-222ENST00000490207 IFNA6P05013 189 aa15.03■□□□□ -0
SMC4-222ENST00000490207 CLEC19AQ6UXS0 136 aa15.03■□□□□ -0
SMC4-222ENST00000490207 OR1L8Q8NGR8 309 aa15.03■□□□□ -0
SMC4-222ENST00000490207 RAB2BQ8WUD1 216 aa15.03■□□□□ -0
SMC4-222ENST00000490207 ABHD1Q96SE0 405 aa15.03■□□□□ -0
SMC4-222ENST00000490207 FAM212BQ9NTI7 297 aaPredicted RBP15.03■□□□□ -0
SMC4-222ENST00000490207 MTFP1Q9UDX5 166 aa15.03■□□□□ -0
SMC4-222ENST00000490207 DMRT1Q9Y5R6 373 aa15.03■□□□□ -0
SMC4-222ENST00000490207 U3KQK5 164 aa15.03■□□□□ -0
SMC4-222ENST00000490207 HUWE1Q7Z6Z7 4374 aaKnown RBP15.03■□□□□ -0
SMC4-222ENST00000490207 MFSD2BA6NFX1 497 aa15.02■□□□□ -0
SMC4-222ENST00000490207 SNAPC5O75971 98 aa15.02■□□□□ -0
SMC4-222ENST00000490207 HLA-AP01891 365 aaKnown RBP15.02■□□□□ -0
SMC4-222ENST00000490207 CD3DP04234 171 aa15.02■□□□□ -0
SMC4-222ENST00000490207 TRAPPC2P0DI81 140 aa15.02■□□□□ -0
SMC4-222ENST00000490207 TRAPPC2BP0DI82 140 aa15.02■□□□□ -0
SMC4-222ENST00000490207 TBPP20226 339 aa15.02■□□□□ -0
SMC4-222ENST00000490207 ARL3P36405 182 aa15.02■□□□□ -0
SMC4-222ENST00000490207 LCN12Q6JVE5 192 aa15.02■□□□□ -0
SMC4-222ENST00000490207 CADM3Q8N126 398 aa15.02■□□□□ -0
SMC4-222ENST00000490207 OR10W1Q8NGF6 305 aa15.02■□□□□ -0
SMC4-222ENST00000490207 NSG2Q9Y328 171 aa15.02■□□□□ -0
SMC4-222ENST00000490207 TEX50A0A1B0GTY4 177 aa15.01□□□□□ -0.01
SMC4-222ENST00000490207 FRMD6-AS1P0C7T7 363 aa15.01□□□□□ -0.01
SMC4-222ENST00000490207 PGAM2P15259 253 aa15.01□□□□□ -0.01
SMC4-222ENST00000490207 HSD17B13Q7Z5P4 300 aaPredicted RBP15.01□□□□□ -0.01
SMC4-222ENST00000490207 LHFPL1Q86WI0 220 aa15.01□□□□□ -0.01
SMC4-222ENST00000490207 Q8N402 240 aa15.01□□□□□ -0.01
SMC4-222ENST00000490207 ARRDC1Q8N5I2 433 aa15.01□□□□□ -0.01
SMC4-222ENST00000490207 GDPD1Q8N9F7 314 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms