RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 VAMP1P23763 118 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 VDAC2P45880 294 aaPredicted RBP9.83□□□□□ -0.84
HDAC1-210ENST00000490081 RAB25P57735 213 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 ANKRD55Q3KP44 614 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 C4orf46Q504U0 113 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 PDLIM3Q53GG5 364 aaPredicted RBP9.83□□□□□ -0.84
HDAC1-210ENST00000490081 NMSQ5H8A3 153 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 SSX9Q7RTT3 188 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 HSD17B13Q7Z5P4 300 aaPredicted RBP9.83□□□□□ -0.84
HDAC1-210ENST00000490081 COMMD1Q8N668 190 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 OR5B3Q8NH48 314 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 COQ8AQ8NI60 647 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 ZNF431Q8TF32 576 aaPredicted RBP9.83□□□□□ -0.84
HDAC1-210ENST00000490081 SPIN2AQ99865 258 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 SPIN2BQ9BPZ2 258 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 FOXA2Q9Y261 457 aaPredicted RBP9.83□□□□□ -0.84
HDAC1-210ENST00000490081 RNF114Q9Y508 228 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 TET2Q6N021 2002 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-210ENST00000490081 A0A0B4J293 547 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 A0A1B0GU03 582 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 C15orf61A6NNL5 157 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 INS-IGF2F8WCM5 200 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 ACTL6BO94805 426 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 CNIH1O95406 144 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 AKR1C2P52895 323 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 CFHR3Q02985 330 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 OXA1LQ15070 435 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 RGS21Q2M5E4 152 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 KLK9Q2XQG4 91 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 STPG2Q8N412 459 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 SLC35G3Q8N808 338 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 MINDY2Q8NBR6 621 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 OR1L8Q8NGR8 309 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 OR52E5Q8NH55 327 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 ARPC1AQ92747 370 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 PHB2Q99623 299 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 COMMD5Q9GZQ3 224 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 GPN1Q9HCN4 374 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-210ENST00000490081 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-210ENST00000490081 KLK9Q9UKQ9 250 aa9.82□□□□□ -0.84
HDAC1-210ENST00000490081 TRAV3A0A0B4J244 114 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 TEX50A0A1B0GTY4 177 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 SH2D7A6NKC9 451 aaPredicted RBP9.81□□□□□ -0.84
HDAC1-210ENST00000490081 ATP6V0E1O15342 81 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 OR9G9P0C7N8 305 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 MDKP21741 143 aaPredicted RBP9.81□□□□□ -0.84
HDAC1-210ENST00000490081 PPIFP30405 207 aaKnown RBP9.81□□□□□ -0.84
HDAC1-210ENST00000490081 OR2B8PP59922 312 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 HSPE1P61604 102 aaKnown RBP9.81□□□□□ -0.84
HDAC1-210ENST00000490081 NDPQ00604 133 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 TNXAQ16473 311 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 AWAT1Q58HT5 328 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 C9orf152Q5JTZ5 239 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 LYZL2Q7Z4W2 148 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 OR4A16Q8NH70 328 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 WFDC12Q8WWY7 111 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 SRSF12Q8WXF0 261 aaKnown RBP9.81□□□□□ -0.84
HDAC1-210ENST00000490081 GPR146Q96CH1 333 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 CLCC1Q96S66 551 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 NDUFA4L2Q9NRX3 87 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 ANK2Q01484 3957 aa9.81□□□□□ -0.84
HDAC1-210ENST00000490081 TRAV41A0A0B4J266 112 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 MSGN1A6NI15 193 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 H3BUA1 57 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 PITX3O75364 302 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 IGLV1-40P01703 118 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 IGHG4P01861 327 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 SULT1A3P0DMM9 295 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 SULT1A4P0DMN0 295 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 RPL27AP46776 148 aaKnown RBP9.8□□□□□ -0.84
HDAC1-210ENST00000490081 SLC35B1P78383 322 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 Q6ZRM9 215 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 TTC9CQ8N5M4 171 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 OR5M8Q8NGP6 311 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 CASTOR1Q8WTX7 329 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 FBXO7Q9Y3I1 522 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 OR51B2Q9Y5P1 312 aa9.8□□□□□ -0.84
HDAC1-210ENST00000490081 A0A0G2JRQ6 117 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 A0A1B0GW64 132 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 C7orf66A4D0T2 115 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 CGB1A6NKQ9 187 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 TEX22C9J3V5 150 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 FAM90A26D6RGX4 464 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 E7EUB6 86 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 CRYGCP07315 174 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 ELANEP08246 267 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 TRAPPC2P0DI81 140 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 TRAPPC2BP0DI82 140 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 SPNP16150 400 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 SMCO1Q147U7 214 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 ARSJQ5FYB0 599 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-210ENST00000490081 CENPVQ7Z7K6 275 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-210ENST00000490081 C12orf45Q8N5I9 185 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-210ENST00000490081 QTRT1Q9BXR0 403 aaKnown RBP9.79□□□□□ -0.84
HDAC1-210ENST00000490081 PARP11Q9NR21 331 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 TENM1Q9UKZ4 2725 aa9.79□□□□□ -0.84
HDAC1-210ENST00000490081 PSMB11A5LHX3 300 aa9.78□□□□□ -0.84
HDAC1-210ENST00000490081 NPIPB5A8MRT5 1133 aa9.78□□□□□ -0.84
HDAC1-210ENST00000490081 IFNA21P01568 189 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms