RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.24□□□□□ -1.41
SMC6-209ENST00000489535 TMEM140Q9NV12 185 aa6.24□□□□□ -1.41
SMC6-209ENST00000489535 COA4Q9NYJ1 87 aa6.24□□□□□ -1.41
SMC6-209ENST00000489535 WASHC3Q9Y3C0 194 aa6.24□□□□□ -1.41
SMC6-209ENST00000489535 INSIG2Q9Y5U4 225 aa6.24□□□□□ -1.41
SMC6-209ENST00000489535 ZFHX3Q15911 3703 aa6.24□□□□□ -1.41
SMC6-209ENST00000489535 MED13LQ71F56 2210 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 FBN2P35556 2912 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 CELSR2Q9HCU4 2923 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 IGHV3-72A0A0B4J1Y9 119 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 IGHV1-3A0A0C4DH29 117 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 FAM24AA6NFZ4 105 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 FAM90A9PA6NNJ1 464 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 ODF3BA8MYP8 253 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 LEUTXA8MZ59 168 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 RNASEK-C17orf49H0YIS7 233 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 LY6LH3BQJ8 138 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 BCL2L11O43521 198 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 SYNGR2O43760 224 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 CHST1O43916 411 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 GPR137BO60478 399 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 MED6O75586 246 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 IGKV1-16P04430 117 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 IAPPP10997 89 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 MMP9P14780 707 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 USF1P22415 310 aaPredicted RBP6.23□□□□□ -1.41
SMC6-209ENST00000489535 MC5RP33032 325 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 CEACAM3P40198 252 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 RAB13P51153 203 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 ARHGDIBP52566 201 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 LGALS4P56470 323 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 OR2B8PP59922 312 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 RPS16P62249 146 aaKnown RBP6.23□□□□□ -1.41
SMC6-209ENST00000489535 RPL23AP62750 156 aaKnown RBP6.23□□□□□ -1.41
SMC6-209ENST00000489535 POU2AF1Q16633 256 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 TMEM177Q53S58 311 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 TPTE2P1Q5T6R2 138 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 OR4A47Q6IF82 309 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 OR8H1Q8NGG4 311 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 OSR1Q8TAX0 266 aaPredicted RBP6.23□□□□□ -1.41
SMC6-209ENST00000489535 LHX4Q969G2 390 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 FLYWCH2Q96CP2 140 aaKnown RBP6.23□□□□□ -1.41
SMC6-209ENST00000489535 AQP10Q96PS8 301 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 ARPC5LQ9BPX5 153 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 QTRT1Q9BXR0 403 aaKnown RBP6.23□□□□□ -1.41
SMC6-209ENST00000489535 RBKSQ9H477 322 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 C11orf1Q9H5F2 150 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 HILPDAQ9Y5L2 63 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 LRRK2Q5S007 2527 aa6.23□□□□□ -1.41
SMC6-209ENST00000489535 PRRC2AP48634 2157 aaKnown RBP6.23□□□□□ -1.41
SMC6-209ENST00000489535 TRAV3A0A0B4J244 114 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 A0A1W2PPI3 338 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 C15orf61A6NNL5 157 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 SAA1P0DJI8 122 aaPredicted RBP6.22□□□□□ -1.41
SMC6-209ENST00000489535 CAV2P51636 162 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 PAX9P55771 341 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 UBE2KP61086 200 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 UBA52P62987 128 aaKnown RBP6.22□□□□□ -1.41
SMC6-209ENST00000489535 TNFRSF9Q07011 255 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 Q5PR19 223 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 LDLRAD2Q5SZI1 272 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 CLEC9AQ6UXN8 241 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 LHFPL4Q7Z7J7 247 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 OR2C3Q8N628 320 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 OR4C13Q8NGP0 309 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 RAB40CQ96S21 281 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 AIFM2Q9BRQ8 373 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 ZNF471Q9BX82 626 aaPredicted RBP6.22□□□□□ -1.41
SMC6-209ENST00000489535 MS4A7Q9GZW8 240 aaPredicted RBP6.22□□□□□ -1.41
SMC6-209ENST00000489535 LYRM2Q9NU23 88 aaPredicted RBP6.22□□□□□ -1.41
SMC6-209ENST00000489535 BET1LQ9NYM9 111 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 PSENENQ9NZ42 101 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 DPM3Q9P2X0 92 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 HSPB7Q9UBY9 170 aa6.22□□□□□ -1.41
SMC6-209ENST00000489535 USP9YO00507 2555 aaPredicted RBP6.22□□□□□ -1.41
SMC6-209ENST00000489535 NAV3Q8IVL0 2385 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 A0A096LNT2 108 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 IGSF23A1L1A6 192 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 SRRM4A7MD48 611 aaKnown RBP6.21□□□□□ -1.42
SMC6-209ENST00000489535 CEBPZOSA8MTT3 80 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 H3BP45 60 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 UPK2O00526 184 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 KBTBD11O94819 623 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 SPDEFO95238 335 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 TMEM50AO95807 157 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 IFNA17P01571 189 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 MSMBP08118 114 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 UBE2E1P51965 193 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 EWSR1Q01844 656 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMC6-209ENST00000489535 NHLH2Q02577 135 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 PAX8Q06710 450 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 TMEM267Q0VDI3 215 aaPredicted RBP6.21□□□□□ -1.42
SMC6-209ENST00000489535 SPINK9Q5DT21 86 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 MINOS1Q5TGZ0 78 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 GPR157Q5UAW9 335 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 TEX261Q6UWH6 196 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 ZNF767PQ75MW2 155 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 SLC51BQ86UW2 128 aa6.21□□□□□ -1.42
SMC6-209ENST00000489535 PUSL1Q8N0Z8 303 aaKnown RBP6.21□□□□□ -1.42
SMC6-209ENST00000489535 OR8H3Q8N146 312 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms