RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 NHLH2Q02577 135 aa10.29□□□□□ -0.76
NELFE-209ENST00000488426 RPL7L1Q6DKI1 246 aaKnown RBP10.29□□□□□ -0.76
NELFE-209ENST00000488426 VKORC1L1Q8N0U8 176 aa10.29□□□□□ -0.76
NELFE-209ENST00000488426 PNKDQ8N490 385 aa10.29□□□□□ -0.76
NELFE-209ENST00000488426 UBAC2Q8NBM4 344 aa10.29□□□□□ -0.76
NELFE-209ENST00000488426 OR4P4Q8NGL7 312 aa10.29□□□□□ -0.76
NELFE-209ENST00000488426 OR4C13Q8NGP0 309 aa10.29□□□□□ -0.76
NELFE-209ENST00000488426 POLR3KQ9Y2Y1 108 aaPredicted RBP10.29□□□□□ -0.76
NELFE-209ENST00000488426 C15orf61A6NNL5 157 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 IL6RP08887 468 aaPredicted RBP10.28□□□□□ -0.76
NELFE-209ENST00000488426 IAPPP10997 89 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 SULT1A1P50225 295 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 DSCR9P59020 149 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 SPCS3P61009 180 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 DIAPH2-AS1Q14236 149 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 TMEM249Q2WGJ8 235 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 EIF5AL1Q6IS14 154 aaKnown RBP10.28□□□□□ -0.76
NELFE-209ENST00000488426 DTD1Q8TEA8 209 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 LHX4Q969G2 390 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 FLYWCH2Q96CP2 140 aaKnown RBP10.28□□□□□ -0.76
NELFE-209ENST00000488426 BSCL2Q96G97 398 aaPredicted RBP10.28□□□□□ -0.76
NELFE-209ENST00000488426 QTRT1Q9BXR0 403 aaKnown RBP10.28□□□□□ -0.76
NELFE-209ENST00000488426 SMIM3Q9BZL3 60 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 YAE1D1Q9NRH1 226 aa10.28□□□□□ -0.76
NELFE-209ENST00000488426 FOXA2Q9Y261 457 aaPredicted RBP10.28□□□□□ -0.76
NELFE-209ENST00000488426 IGHV4-61A0A0C4DH41 118 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 LY6LH3BQJ8 138 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 SNAPINO95295 136 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 DLX1P56177 255 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 OR2B8PP59922 312 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 LCN2P80188 198 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 ZNF266Q14584 549 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 STPG2Q8N412 459 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 HARBI1Q96MB7 349 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 ARV1Q9H2C2 271 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 SLC25A32Q9H2D1 315 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 SIRT7Q9NRC8 400 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 TMEM14BQ9NUH8 114 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 BET1LQ9NYM9 111 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 PRNDQ9UKY0 176 aa10.27□□□□□ -0.76
NELFE-209ENST00000488426 MXRA5Q9NR99 2828 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 CEBPZOSA8MTT3 80 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 ODF3BA8MYP8 253 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 H3BP45 60 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 CD5LO43866 347 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 CRLF1O75462 422 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 SCAF4O95104 1147 aaKnown RBP10.27□□□□□ -0.77
NELFE-209ENST00000488426 IFNA17P01571 189 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 HTR1DP28221 377 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 CEACAM3P40198 252 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 LOXL1Q08397 574 aaPredicted RBP10.27□□□□□ -0.77
NELFE-209ENST00000488426 FAM209BQ5JX69 171 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 PUSL1Q8N0Z8 303 aaKnown RBP10.27□□□□□ -0.77
NELFE-209ENST00000488426 VSTM2AQ8TAG5 236 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 RPEQ96AT9 228 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 MDFIQ99750 246 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 SIRPDQ9H106 197 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 WFDC1Q9HC57 220 aa10.27□□□□□ -0.77
NELFE-209ENST00000488426 IGHV1-3A0A0C4DH29 117 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 UPK2O00526 184 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 CST7O76096 145 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 ARG1P05089 322 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 SAA1P0DJI8 122 aaPredicted RBP10.26□□□□□ -0.77
NELFE-209ENST00000488426 HCP5Q6MZN7 132 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 TMEM14EPQ6UXP3 125 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 VMO1Q7Z5L0 202 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 OR1S2Q8NGQ3 325 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 OR5C1Q8NGR4 320 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 OR4A5Q8NH83 315 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 CLCC1Q96S66 551 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 MS4A7Q9GZW8 240 aaPredicted RBP10.26□□□□□ -0.77
NELFE-209ENST00000488426 MED9Q9NWA0 146 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 FKBP11Q9NYL4 201 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 DPM3Q9P2X0 92 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 INSIG2Q9Y5U4 225 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 ARHGAP32A7KAX9 2087 aa10.26□□□□□ -0.77
NELFE-209ENST00000488426 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.25□□□□□ -0.774e-9■■■■□ 26.6
NELFE-209ENST00000488426 TRAV3A0A0B4J244 114 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 SRRM4A7MD48 611 aaKnown RBP10.25□□□□□ -0.77
NELFE-209ENST00000488426 F8W036 122 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 DFFBO76075 338 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 NMBP08949 121 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 IGHV4-31P0DP07 118 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 USF1P22415 310 aaPredicted RBP10.25□□□□□ -0.77
NELFE-209ENST00000488426 LGALS7P47929 136 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 DYNLT3P51808 116 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 HBG1P69891 147 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 HBG2P69892 147 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 PRB3Q04118 309 aaPredicted RBP10.25□□□□□ -0.77
NELFE-209ENST00000488426 TMEM267Q0VDI3 215 aaPredicted RBP10.25□□□□□ -0.77
NELFE-209ENST00000488426 BTN1A1Q13410 526 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 SPANXN5Q5MJ07 72 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 TPTE2P1Q5T6R2 138 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 ATP5SQ99766 215 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 GINS3Q9BRX5 216 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 TCF19Q9Y242 345 aa10.25□□□□□ -0.77
NELFE-209ENST00000488426 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
NELFE-209ENST00000488426 KBTBD11O94819 623 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms