RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TMEM54Q969K7 222 aa3.05□□□□□ -1.92
VPS8-224ENST00000488255 FAM104AQ969W3 186 aa3.05□□□□□ -1.92
VPS8-224ENST00000488255 GALNT14Q96FL9 552 aa3.05□□□□□ -1.92
VPS8-224ENST00000488255 KCNS1Q96KK3 526 aa3.05□□□□□ -1.92
VPS8-224ENST00000488255 C2orf50Q96LR7 162 aa3.05□□□□□ -1.92
VPS8-224ENST00000488255 PARP11Q9NR21 331 aa3.05□□□□□ -1.92
VPS8-224ENST00000488255 COMMD3Q9UBI1 195 aa3.05□□□□□ -1.92
VPS8-224ENST00000488255 TNFSF18Q9UNG2 199 aa3.05□□□□□ -1.92
VPS8-224ENST00000488255 MEGF6O75095 1541 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 KDM5DQ9BY66 1539 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 FANCD2Q9BXW9 1451 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 NFASCO94856 1347 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 MYH11P35749 1972 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 TRAV8-6A0A0B4J262 113 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 IGHV1-69-2A0A0G2JMI3 117 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 DHRS12A0PJE2 317 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 TMEM150BA6NC51 233 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 PGPA6NDG6 321 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 LINC01619G3V211 115 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 ISLRO14498 428 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 UBE2L6O14933 153 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 NPIPB7O75200 414 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 PDCD6O75340 191 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 PGA4P0DJD7 388 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 PGA3P0DJD8 388 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 OR12D1P0DN82 309 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 FGF6P10767 208 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 CTLA4P16410 223 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 RPL7P18124 248 aaKnown RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 VDAC1P21796 283 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 ZNF93P35789 620 aaPredicted RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 SNCAP37840 140 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 CXCL12P48061 93 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 REG1BP48304 166 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 AKR1C2P52895 323 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 APOC4P55056 127 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 CRADDP78560 199 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 DEFA5Q01523 94 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 IFITM3Q01628 133 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 EIF3IQ13347 325 aaKnown RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 TMEM183BQ1AE95 376 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 Q499Y3 187 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 CENPWQ5EE01 88 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 AMMECR1LQ6DCA0 310 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 C11orf71Q6IPW1 123 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 MRPL54Q6P161 138 aaKnown RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 GLIPR1L1Q6UWM5 242 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 ZNF720Q7Z2F6 126 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 ATOH7Q8N100 152 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 KCNRGQ8N5I3 272 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 Q8N9L7 120 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 DCAF4L2Q8NA75 395 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 RPS4Y2Q8TD47 263 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 GNPNAT1Q96EK6 184 aaPredicted RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 AQP10Q96PS8 301 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 TRIB3Q96RU7 358 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 GGTLC1Q9BX51 225 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 MRPL32Q9BYC8 188 aaKnown RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 RNASE7Q9H1E1 156 aaKnown RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 ZNF331Q9NQX6 463 aaPredicted RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 HEBP1Q9NRV9 189 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 NUFIP1Q9UHK0 495 aaKnown RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 SIGLEC7Q9Y286 467 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 PKIGQ9Y2B9 76 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 MPC1Q9Y5U8 109 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 MYO5BQ9ULV0 1848 aa3.04□□□□□ -1.92
VPS8-224ENST00000488255 INO80Q9ULG1 1556 aaPredicted RBP3.04□□□□□ -1.92
VPS8-224ENST00000488255 MBD5Q9P267 1494 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 IGHV1OR21-1A0A087WYE8 117 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 TMED7-TICAM2A0A0A6YYA0 188 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 FAM236DA0A1B0GTK5 79 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 IRGMA1A4Y4 181 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 NCBP2LA6PVI3 153 aaKnown RBP3.03□□□□□ -1.92
VPS8-224ENST00000488255 ZNF850A8MQ14 1090 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 ZNF705EA8MWA4 302 aaPredicted RBP3.03□□□□□ -1.92
VPS8-224ENST00000488255 XKRYO14609 159 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 NPFFO15130 113 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 SLC37A4O43826 429 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 KRASP01116 189 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 IGHMP01871 453 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 CECR9P0C854 216 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 FAM236CP0DP71 79 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 ZNF708P17019 499 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 CXCL3P19876 107 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 RPS3P23396 243 aaKnown RBP eCLIP3.03□□□□□ -1.92
VPS8-224ENST00000488255 CRYBB3P26998 211 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 PRSS3P35030 304 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 HOXC5Q00444 222 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 MEF2CQ06413 473 aaPredicted RBP3.03□□□□□ -1.92
VPS8-224ENST00000488255 RTL8BQ17RB0 113 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 C12orf74Q32Q52 190 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 AADACL3Q5VUY0 350 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 Q6P435 159 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 SBSNQ6UWP8 590 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 AMTNQ6UX39 209 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 CXCL17Q6UXB2 119 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 ZNF705AQ6ZN79 300 aaPredicted RBP3.03□□□□□ -1.92
VPS8-224ENST00000488255 LY6G5BQ8NDX9 201 aa3.03□□□□□ -1.92
VPS8-224ENST00000488255 OR10AD1Q8NGE0 317 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms