RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CXorf58Q96LI9 332 aa11.24□□□□□ -0.61
MCF2L-228ENST00000487354 GPHA2Q96T91 129 aa11.24□□□□□ -0.61
MCF2L-228ENST00000487354 KRTAP4-5Q9BYR2 181 aa11.24□□□□□ -0.61
MCF2L-228ENST00000487354 RAB22AQ9UL26 194 aa11.24□□□□□ -0.61
MCF2L-228ENST00000487354 MRPS7Q9Y2R9 242 aaKnown RBP11.24□□□□□ -0.61
MCF2L-228ENST00000487354 OR2W1Q9Y3N9 320 aa11.24□□□□□ -0.61
MCF2L-228ENST00000487354 A0A075B6Q4 140 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 F8W735 103 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-228ENST00000487354 TGOLN2O43493 480 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 RPA2P15927 270 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 NFYAP23511 347 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-228ENST00000487354 PSMD7P51665 324 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 OR2B8PP59922 312 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 RPL8P62917 257 aaKnown RBP11.23□□□□□ -0.61
MCF2L-228ENST00000487354 MRPS15P82914 257 aaKnown RBP11.23□□□□□ -0.61
MCF2L-228ENST00000487354 PACRGLQ8N7B6 248 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 CD300LFQ8TDQ1 290 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 C2CD4CQ8TF44 421 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 DAZ1Q9NQZ3 744 aaKnown RBP11.23□□□□□ -0.61
MCF2L-228ENST00000487354 PRELID3BQ9Y3B1 194 aa11.23□□□□□ -0.61
MCF2L-228ENST00000487354 DHFRP00374 187 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 MED14OSP0DP75 135 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 CD36P16671 472 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 HLA-GP17693 338 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 PTBP1P26599 531 aaKnown RBP eCLIP11.22□□□□□ -0.61
MCF2L-228ENST00000487354 CALRP27797 417 aaKnown RBP11.22□□□□□ -0.61
MCF2L-228ENST00000487354 MED22Q15528 200 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 TIMM50Q3ZCQ8 353 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 PLET1Q6UQ28 207 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 SSX9Q7RTT3 188 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 C10orf67Q8IYJ2 551 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 GVQW1Q8N7I0 195 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 UFD1Q92890 307 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 RARRES2Q99969 163 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 MFFQ9GZY8 342 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 V9GY05 133 aa11.22□□□□□ -0.61
MCF2L-228ENST00000487354 IGHV3OR16-8A0A075B7F1 116 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 TRAV3A0A0B4J244 114 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 DEFB4AO15263 64 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 CTSDP07339 412 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-228ENST00000487354 CRHBPP24387 322 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 TCTAP57738 103 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 OR10A3P58181 314 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 FABP5Q01469 135 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 TCTEX1D2Q8WW35 142 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 HSD17B10Q99714 261 aaKnown RBP11.21□□□□□ -0.61
MCF2L-228ENST00000487354 CHRDL1Q9BU40 450 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 CSTL1Q9H114 145 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 BET1LQ9NYM9 111 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 SPATA2Q9UM82 520 aa11.21□□□□□ -0.61
MCF2L-228ENST00000487354 OR2T8A6NH00 312 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 OR4C46A6NHA9 309 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 ARL6IP5O75915 188 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 DEFA4P12838 97 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 DTYMKP23919 212 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 ADMP35318 185 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 MFAP2P55001 183 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 LINC00336Q6ZUF6 198 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 MFSD4AQ8N468 514 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 OR11H2Q8NH07 326 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 TAS2R8Q9NYW2 309 aa11.2□□□□□ -0.62
MCF2L-228ENST00000487354 MPTX1A8MV57 137 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 ZNF207O43670 478 aaKnown RBP11.19□□□□□ -0.62
MCF2L-228ENST00000487354 RAB6AP20340 208 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 GADD45AP24522 165 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 LAMTOR1Q6IAA8 161 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 ZNF773Q6PK81 442 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 OR10W1Q8NGF6 305 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 VN1R17PQ8TDU5 208 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 RNF2Q99496 336 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 C8orf4Q9NR00 106 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 ETV7Q9Y603 341 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 AGRNO00468 2067 aa11.19□□□□□ -0.62
MCF2L-228ENST00000487354 PTGES3LE9PB15 166 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 NDUFA4O00483 81 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 RTL8CO15255 209 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 SLC22A5O76082 557 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 IFNA4P05014 189 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 WT1-ASQ06250 92 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 SSX1Q16384 188 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 NR2C2APQ86WQ0 139 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 Q8NAQ8 132 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
MCF2L-228ENST00000487354 IGLL5B9A064 214 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 K7EMT4 169 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 UPK2O00526 184 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 HRASP01112 189 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 TALDO1P37837 337 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 POU2AF1Q16633 256 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 ZNF66Q6ZN08 573 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 GDPD1Q8N9F7 314 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 BSCL2Q96G97 398 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-228ENST00000487354 CENPOQ9BU64 300 aa11.17□□□□□ -0.62
MCF2L-228ENST00000487354 IGHV3-21A0A0B4J1V1 117 aa11.16□□□□□ -0.62
MCF2L-228ENST00000487354 IFITM5A6NNB3 132 aa11.16□□□□□ -0.62
MCF2L-228ENST00000487354 CHEK1O14757 476 aa11.16□□□□□ -0.62
MCF2L-228ENST00000487354 TNFSF12O43508 249 aa11.16□□□□□ -0.62
MCF2L-228ENST00000487354 XRCC3O43542 346 aa11.16□□□□□ -0.62
MCF2L-228ENST00000487354 SSX5O60225 188 aa11.16□□□□□ -0.62
MCF2L-228ENST00000487354 PSMA1P25786 263 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms