RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 SRD5A2P31213 254 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 BMI1P35226 326 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 SSTR5P35346 364 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 GPR6P46095 362 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 CLDN18P56856 261 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 MRPS21P82921 87 aaKnown RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 TRAT1Q6PIZ9 186 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 ZNF645Q8N7E2 425 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 ZBTB34Q8NCN2 500 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 OR2V2Q96R30 315 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 HSD17B10Q99714 261 aaKnown RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 FNDC4Q9H6D8 234 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 TRAV24A0A0B4J272 114 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 A6NDN8 102 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 PPIAL4DF5H284 164 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 CD5LO43866 347 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 NEURL1O76050 574 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 CA1P00915 261 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 CCR5P51681 352 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 DSCR4P56555 118 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 RPL8P62917 257 aaKnown RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 PAX2Q02962 417 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 FAM71F2Q6NXP2 309 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 FER1L6-AS1Q8NA97 138 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 OR1B1Q8NGR6 318 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 MAP1LC3CQ9BXW4 147 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 PRRG4Q9BZD6 226 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 MS4A5Q9H3V2 200 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 WDR54Q9H977 334 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 TECRQ9NZ01 308 aaKnown RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 LY96Q9Y6Y9 160 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 THADAQ6YHU6 1953 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 A0A087X0K7 114 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 C17orf98A8MV24 154 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 C3orf80F5H4A9 247 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 MRPL33O75394 65 aaKnown RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 SCRG1O75711 98 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 CER1O95813 267 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 TAS2R45P59539 299 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 HIST1H1AQ02539 215 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-209ENST00000487188 SPATA31B1PQ5VZV4 182 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 VWA1Q6PCB0 445 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 SLC23A3Q6PIS1 610 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 ABCA7Q8IZY2 2146 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 DEFB125Q8N687 156 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 OR4S2Q8NH73 311 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 TNFRSF14Q92956 283 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 GGTLC1Q9BX51 225 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 TP73-AS1Q9UF72 201 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 USF3Q68DE3 2245 aa5.21□□□□□ -1.57
VPS13D-209ENST00000487188 C2orf16Q68DN1 1984 aa5.21□□□□□ -1.57
VPS13D-209ENST00000487188 IGLV3-32A0A0A0MS00 114 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 A0A1W2PPC4 97 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 RRHO14718 337 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 FCGR3BO75015 233 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 HBZP02008 142 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 HIST1H1EP10412 219 aaKnown RBP5.21□□□□□ -1.58
VPS13D-209ENST00000487188 GPR183P32249 361 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 PTGDSP41222 190 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 ARF6P62330 175 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 EBLN2Q6P2I7 272 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 STPG3Q8N7X2 389 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 FGFBP3Q8TAT2 258 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 SSBP4Q9BWG4 385 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-209ENST00000487188 SF3B5Q9BWJ5 86 aaKnown RBP5.21□□□□□ -1.58
VPS13D-209ENST00000487188 SRXN1Q9BYN0 137 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 URB1O60287 2271 aaKnown RBP5.21□□□□□ -1.58
VPS13D-209ENST00000487188 IGHV3-43A0A0B4J1X8 118 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 A0A1B0GV72 72 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 TMEM30CPA0ZSE6 113 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 C15orf62A8K5M9 175 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 PRSS47A8MTI9 375 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 SNAI2O43623 268 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 IGHV3-43DP0DP04 118 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 TEPPQ6URK8 271 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 TREML4Q6UXN2 200 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 DEFB123Q8N688 67 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 NFAM1Q8NET5 270 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-209ENST00000487188 FAM216AQ8WUB2 273 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 TMEM186Q96B77 213 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 PRDM14Q9GZV8 571 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 NPVFQ9HCQ7 196 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 RARRES3Q9UL19 164 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 PSG11Q9UQ72 335 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 KNTC1P50748 2209 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 IGHV1OR21-1A0A087WYE8 117 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 ISLRO14498 428 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 OR10J4P0C629 311 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 MYF5P13349 255 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 FOXA3P55318 350 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-209ENST00000487188 SLAQ13239 276 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 ZNF718Q3SXZ3 478 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 TMEM108Q6UXF1 575 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 OR2M7Q8NG81 312 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 OR4F17Q8NGA8 305 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 OR1N2Q8NGR9 330 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 MGST2Q99735 147 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 RTL8AQ9BWD3 113 aa5.21□□□□□ -1.58
VPS13D-209ENST00000487188 UBE2ZQ9H832 354 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms