RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 PARP11Q9NR21 331 aa7.76□□□□□ -1.17
CTPS1-210ENST00000486889 PLSCR3Q9NRY6 295 aa7.76□□□□□ -1.17
CTPS1-210ENST00000486889 THYN1Q9P016 225 aa7.76□□□□□ -1.17
CTPS1-210ENST00000486889 VPS13CQ709C8 3753 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 C15orf61A6NNL5 157 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 SCAF4O95104 1147 aaKnown RBP7.75□□□□□ -1.17
CTPS1-210ENST00000486889 IGLV2-23P01705 113 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 IGHG2P01859 326 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 TRAPPC2P0DI81 140 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 TRAPPC2BP0DI82 140 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 VSIG10L2P0DP72 767 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 DEFA4P12838 97 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 HOXA1P49639 335 aaPredicted RBP7.75□□□□□ -1.17
CTPS1-210ENST00000486889 SPCS3P61009 180 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 CX3CL1P78423 397 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 ANKRD55Q3KP44 614 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 LYZL2Q7Z4W2 148 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 OR52E5Q8NH55 327 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 GRPEL2Q8TAA5 225 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 FYTTD1Q96QD9 318 aaKnown RBP7.75□□□□□ -1.17
CTPS1-210ENST00000486889 SEC22CQ9BRL7 303 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 HINT2Q9BX68 163 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 QTRT1Q9BXR0 403 aaKnown RBP7.75□□□□□ -1.17
CTPS1-210ENST00000486889 ZNF430Q9H8G1 570 aaPredicted RBP7.75□□□□□ -1.17
CTPS1-210ENST00000486889 GSKIPQ9P0R6 139 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 CACNG5Q9UF02 275 aa7.75□□□□□ -1.17
CTPS1-210ENST00000486889 FOXA2Q9Y261 457 aaPredicted RBP7.75□□□□□ -1.17
CTPS1-210ENST00000486889 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.17
CTPS1-210ENST00000486889 TRAV41A0A0B4J266 112 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 SRRM4A7MD48 611 aaKnown RBP7.74□□□□□ -1.17
CTPS1-210ENST00000486889 CEBPZOSA8MTT3 80 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 CHST1O43916 411 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 SCGB2A1O75556 95 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 HIST1H1BP16401 226 aaKnown RBP7.74□□□□□ -1.17
CTPS1-210ENST00000486889 CNTFRP26992 372 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 ATP5IP56385 69 aaPredicted RBP7.74□□□□□ -1.17
CTPS1-210ENST00000486889 BRWD1-AS2P59051 145 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 HSPE1P61604 102 aaKnown RBP7.74□□□□□ -1.17
CTPS1-210ENST00000486889 FGL1Q08830 312 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 IAH1Q2TAA2 248 aaPredicted RBP7.74□□□□□ -1.17
CTPS1-210ENST00000486889 AKIRIN2Q53H80 203 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 GGNBP1Q5YKI7 109 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 UNQ5815/PRO19632Q6UWF5 114 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 OR52B4Q8NGK2 314 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 OR5M8Q8NGP6 311 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 SGMS2Q8NHU3 365 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 SRSF12Q8WXF0 261 aaKnown RBP7.74□□□□□ -1.17
CTPS1-210ENST00000486889 C2orf50Q96LR7 162 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 C16orf95Q9H693 158 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 ESM1Q9NQ30 184 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 ZNF355PQ9NSJ1 428 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 TMEM14BQ9NUH8 114 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 ZNF580Q9UK33 172 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 ALG5Q9Y673 324 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 SONP18583 2426 aaKnown RBP7.74□□□□□ -1.17
CTPS1-210ENST00000486889 MTORP42345 2549 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 ZANQ9Y493 2812 aa7.74□□□□□ -1.17
CTPS1-210ENST00000486889 IGHV7-81A0A0B4J1V7 117 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 CLPSL1A2RUU4 121 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 C7orf66A4D0T2 115 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 MSGN1A6NI15 193 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 H3BUA1 57 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 L7N2F9 121 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 CORTO00230 105 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 GOSR2O14653 212 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 ST8SIA3O43173 380 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 IGKV1-5P01602 117 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 IGF1P05019 195 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 CRYGBP07316 175 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 HKR1P10072 659 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 NKX2-1P43699 371 aaPredicted RBP7.73□□□□□ -1.17
CTPS1-210ENST00000486889 OR2B8PP59922 312 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 BLCAPP62952 87 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 VAMP2P63027 116 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 RELBQ01201 579 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 NMSQ5H8A3 153 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 FAM209BQ5JX69 171 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 TEX38Q6PEX7 206 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 Q8N2B8 174 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 GPR146Q96CH1 333 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 RITA1Q96K30 269 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 SLA2Q9H6Q3 261 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 HEYLQ9NQ87 328 aaPredicted RBP7.73□□□□□ -1.17
CTPS1-210ENST00000486889 MGAT4CQ9UBM8 478 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 ZFHX3Q15911 3703 aa7.73□□□□□ -1.17
CTPS1-210ENST00000486889 ZNF469Q96JG9 3925 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-210ENST00000486889 TEX50A0A1B0GTY4 177 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 TMEM89A2RUT3 159 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 PSMB11A5LHX3 300 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 ATP6V0E1O15342 81 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 SCGB1D2O95969 90 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 IGKV1-39P01597 117 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 IGKV1D-39P04432 117 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 OR9G9P0C7N8 305 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 SPNP16150 400 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 NUP62P37198 522 aaPredicted RBP7.72□□□□□ -1.17
CTPS1-210ENST00000486889 HTR2BP41595 481 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 RAB11AP62491 216 aa7.72□□□□□ -1.17
CTPS1-210ENST00000486889 RPL23AP62750 156 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms