RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 CRYGBP07316 175 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 HOXA1P49639 335 aaPredicted RBP9.4□□□□□ -0.9
PRKCB-207ENST00000486868 ARF6P62330 175 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 SRSF1Q07955 248 aaKnown RBP eCLIP9.4□□□□□ -0.9
PRKCB-207ENST00000486868 BSXQ3C1V8 233 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 HCP5Q6MZN7 132 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 CCDC144NLQ6NUI1 221 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 Q6ZRG5 221 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
PRKCB-207ENST00000486868 CLDND2Q8NHS1 167 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 C10orf105Q8TEF2 133 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 PIMREGQ9BSJ6 248 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 SMDT1Q9H4I9 107 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 NDUFA4L2Q9NRX3 87 aa9.4□□□□□ -0.9
PRKCB-207ENST00000486868 TBL2Q9Y4P3 447 aaKnown RBP9.4□□□□□ -0.9
PRKCB-207ENST00000486868 PRSS46E5RG02 174 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 TSPAN9O75954 239 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 HBE1P02100 147 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 MBP02144 154 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 NPY1RP25929 384 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 ZFP36P26651 326 aaKnown RBP9.39□□□□□ -0.91
PRKCB-207ENST00000486868 REG1BP48304 166 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 CAMLGP49069 296 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 DIAPH2-AS1Q14236 149 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 C2orf83Q53S99 150 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 TOR2AQ5JU69 321 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 AKR1C8PQ5T2L2 129 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 SP5Q6BEB4 398 aaPredicted RBP9.39□□□□□ -0.91
PRKCB-207ENST00000486868 ETV3LQ6ZN32 361 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 THNSL2Q86YJ6 484 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 SLC24A4Q8NFF2 622 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 FAM168AQ92567 244 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 SRSF8Q9BRL6 282 aaKnown RBP9.39□□□□□ -0.91
PRKCB-207ENST00000486868 COMMD5Q9GZQ3 224 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 SH3BGRL3Q9H299 93 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 WDR83OSQ9Y284 106 aa9.39□□□□□ -0.91
PRKCB-207ENST00000486868 A0A1W2PPI3 338 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 PRH1P02810 166 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 COX7A1P24310 79 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 COMPP49747 757 aaPredicted RBP9.38□□□□□ -0.91
PRKCB-207ENST00000486868 UBE2E1P51965 193 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 ERHP84090 104 aaKnown RBP9.38□□□□□ -0.91
PRKCB-207ENST00000486868 PMS2P11Q13670 270 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 OR8G2PQ6IF36 304 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 CLEC2AQ6UVW9 174 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
PRKCB-207ENST00000486868 MOB3BQ86TA1 216 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 FBXO7Q9Y3I1 522 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 IGSF10Q6WRI0 2623 aa9.38□□□□□ -0.91
PRKCB-207ENST00000486868 C17orf112F2Z3M2 114 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 TSPAN15O95858 294 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 SNCAP37840 140 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 DVL1P1P54792 670 aaPredicted RBP9.37□□□□□ -0.91
PRKCB-207ENST00000486868 ATP5J2P56134 94 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 RAB2AP61019 212 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 EBI3Q14213 229 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 PRSS8Q16651 343 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 PVRIGQ6DKI7 326 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 VMO1Q7Z5L0 202 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 NPBQ8NG41 125 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 MBD3L1Q8WWY6 194 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 CACNG8Q8WXS5 425 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 HRH4Q9H3N8 390 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 NARFLQ9H6Q4 476 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 LPAR2Q9HBW0 351 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 NPVFQ9HCQ7 196 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 KCNIP2Q9NS61 270 aa9.37□□□□□ -0.91
PRKCB-207ENST00000486868 KALRNO60229 2985 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 YLPM1P49750 1951 aaKnown RBP9.36□□□□□ -0.91
PRKCB-207ENST00000486868 UBE2L5PA0A1B0GUS4 154 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 RRHO14718 337 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
PRKCB-207ENST00000486868 CA2P00918 260 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 IFNA4P05014 189 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 CD5P06127 495 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 HOXB4P17483 251 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-207ENST00000486868 GPX4P36969 197 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-207ENST00000486868 SUB1P53999 127 aaKnown RBP eCLIP9.36□□□□□ -0.912e-6■■□□□ 12.6
PRKCB-207ENST00000486868 RUNX1Q01196 453 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 PAX8Q06710 450 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 PSG5Q15238 335 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 TMEM41BQ5BJD5 291 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 SPINK9Q5DT21 86 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 ZNF709Q8N972 641 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 ZNF114Q8NC26 417 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 FAM213BQ8TBF2 198 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 RNASEH2CQ8TDP1 164 aaKnown RBP9.36□□□□□ -0.91
PRKCB-207ENST00000486868 TMEM170AQ8WVE7 144 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 CFHR4Q92496 578 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 RBMXL1Q96E39 390 aaKnown RBP9.36□□□□□ -0.91
PRKCB-207ENST00000486868 MALSU1Q96EH3 234 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 PBDC1Q9BVG4 233 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 ZNF430Q9H8G1 570 aaPredicted RBP9.36□□□□□ -0.91
PRKCB-207ENST00000486868 SIRT7Q9NRC8 400 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 SIGLEC9Q9Y336 463 aa9.36□□□□□ -0.91
PRKCB-207ENST00000486868 LSM4Q9Y4Z0 139 aaKnown RBP9.36□□□□□ -0.91
PRKCB-207ENST00000486868 DOCK11Q5JSL3 2073 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms