RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ITLN2Q8WWU7 325 aaPredicted RBP16.58■□□□□ 0.24
HPS3-206ENST00000486530 HARBI1Q96MB7 349 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 SLC39A9Q9NUM3 307 aa16.58■□□□□ 0.24
HPS3-206ENST00000486530 USP24Q9UPU5 2620 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 CTXND1A0A1B0GTU2 59 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 KBTBD11O94819 623 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 SAA1P0DJI8 122 aaPredicted RBP16.57■□□□□ 0.24
HPS3-206ENST00000486530 NPY1RP25929 384 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 FGF8P55075 233 aaPredicted RBP16.57■□□□□ 0.24
HPS3-206ENST00000486530 PRCDQ00LT1 54 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 OR10G4Q8NGN3 311 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 OR10G9Q8NGN4 311 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 OR10G7Q8NGN6 311 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 TMEM170AQ8WVE7 144 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 ST6GALNAC6Q969X2 333 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 NABP2Q9BQ15 211 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 TMEM133Q9H2Q1 129 aa16.57■□□□□ 0.24
HPS3-206ENST00000486530 M0R036 132 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 IFNA1P01562 189 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 IFNA4P05014 189 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 IL3RAP26951 378 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 PMS2P11Q13670 270 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 RHEBQ15382 184 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 ZNF841Q6ZN19 808 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 C11orf42Q8N5U0 333 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 PCGF1Q9BSM1 259 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 PLEKHA3Q9HB20 300 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 SMCO4Q9NRQ5 59 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 A0A1W2PPH5 198 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 SMCO3A2RU48 225 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 AGAP20933 346 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 OR5B3Q8NH48 314 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 TNFRSF14Q92956 283 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 LHX4Q969G2 390 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 FLYWCH2Q96CP2 140 aaKnown RBP16.56■□□□□ 0.24
HPS3-206ENST00000486530 ACTR3CQ9C0K3 210 aaPredicted RBP16.56■□□□□ 0.24
HPS3-206ENST00000486530 RPS10P5Q9NQ39 176 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 HIVEP3Q5T1R4 2406 aa16.56■□□□□ 0.24
HPS3-206ENST00000486530 ZFP92A6NM28 416 aa16.55■□□□□ 0.24
HPS3-206ENST00000486530 REG1BP48304 166 aa16.55■□□□□ 0.24
HPS3-206ENST00000486530 ACOT6Q3I5F7 207 aaPredicted RBP16.55■□□□□ 0.24
HPS3-206ENST00000486530 AKIRIN2Q53H80 203 aa16.55■□□□□ 0.24
HPS3-206ENST00000486530 C11orf71Q6IPW1 123 aa16.55■□□□□ 0.24
HPS3-206ENST00000486530 TREML4Q6UXN2 200 aa16.55■□□□□ 0.24
HPS3-206ENST00000486530 Q8N7P7 452 aa16.55■□□□□ 0.24
HPS3-206ENST00000486530 CYB561D1Q8N8Q1 229 aa16.55■□□□□ 0.24
HPS3-206ENST00000486530 OR4C13Q8NGP0 309 aa16.55■□□□□ 0.24
HPS3-206ENST00000486530 C7orf77A4D0Y5 90 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 RBP4P02753 201 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 SNRNP70P08621 437 aaKnown RBP16.54■□□□□ 0.24
HPS3-206ENST00000486530 RAB13P51153 203 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 TGIF2LXQ8IUE1 241 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 OR8B3Q8NGG8 313 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 OR8B2Q96RD0 313 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 HINT2Q9BX68 163 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 SLC25A22Q9H936 323 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 WASHC3Q9Y3C0 194 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 MYOD1P15172 320 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 AVPI1Q5T686 147 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 OR4A5Q8NH83 315 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 VSTM2AQ8TAG5 236 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 P2RX4Q99571 388 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 MIOXQ9UGB7 285 aa16.54■□□□□ 0.24
HPS3-206ENST00000486530 TEX50A0A1B0GTY4 177 aa16.53■□□□□ 0.24
HPS3-206ENST00000486530 CYB5BO43169 146 aa16.53■□□□□ 0.24
HPS3-206ENST00000486530 CA2P00918 260 aa16.53■□□□□ 0.24
HPS3-206ENST00000486530 PAX6P26367 422 aa16.53■□□□□ 0.24
HPS3-206ENST00000486530 OPRK1P41145 380 aa16.53■□□□□ 0.24
HPS3-206ENST00000486530 ATP5IP56385 69 aaPredicted RBP16.53■□□□□ 0.24
HPS3-206ENST00000486530 C8orf46Q8TAG6 207 aa16.53■□□□□ 0.24
HPS3-206ENST00000486530 NEU4Q8WWR8 484 aaPredicted RBP16.53■□□□□ 0.24
HPS3-206ENST00000486530 NEIL1Q96FI4 390 aaPredicted RBP16.53■□□□□ 0.24
HPS3-206ENST00000486530 VAX2Q9UIW0 290 aa16.53■□□□□ 0.24
HPS3-206ENST00000486530 PUS1Q9Y606 427 aaKnown RBP eCLIP16.53■□□□□ 0.24
HPS3-206ENST00000486530 ABCA4P78363 2273 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 USF1P22415 310 aaPredicted RBP16.52■□□□□ 0.24
HPS3-206ENST00000486530 MC5RP33032 325 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 CEBPGP53567 150 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 DIAPH2-AS1Q14236 149 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 FAM122CQ6P4D5 195 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 RBMS3Q6XE24 437 aaKnown RBP16.52■□□□□ 0.24
HPS3-206ENST00000486530 TIMD4Q96H15 378 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 C20orf24Q9BUV8 137 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 NPVFQ9HCQ7 196 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 KCNIP2Q9NS61 270 aa16.52■□□□□ 0.24
HPS3-206ENST00000486530 FNDC10F2Z333 226 aa16.52■□□□□ 0.23
HPS3-206ENST00000486530 PRB1P04280 392 aa16.52■□□□□ 0.23
HPS3-206ENST00000486530 FBP1P09467 338 aa16.52■□□□□ 0.23
HPS3-206ENST00000486530 TAGLN2P37802 199 aaKnown RBP16.52■□□□□ 0.23
HPS3-206ENST00000486530 RAB1CQ92928 201 aa16.52■□□□□ 0.23
HPS3-206ENST00000486530 BBC3Q96PG8 261 aaPredicted RBP16.52■□□□□ 0.23
HPS3-206ENST00000486530 IGHV2-26A0A0B4J1V2 119 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 PPIAL4CA0A0B4J2A2 164 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 H3BQ15 152 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 SOD3P08294 240 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 PPIAL4GP0DN37 164 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 CDC34P49427 236 aaPredicted RBP16.51■□□□□ 0.23
HPS3-206ENST00000486530 PRRX1P54821 245 aa16.51■□□□□ 0.23
HPS3-206ENST00000486530 RPL8P62917 257 aaKnown RBP16.51■□□□□ 0.23
HPS3-206ENST00000486530 C15orf54Q8N8G6 183 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms