RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 NPIPB3Q92617 1050 aa12.99□□□□□ -0.33
PPFIA4-205ENST00000486360 MRPL20Q9BYC9 149 aaKnown RBP12.99□□□□□ -0.33
PPFIA4-205ENST00000486360 IGHV3-48P01763 117 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 ID3Q02535 119 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 LRRC75BQ2VPJ9 315 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 HLA-DRB5Q30154 266 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 UNQ5815/PRO19632Q6UWF5 114 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 PPOXP50336 477 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 RBM14Q96PK6 669 aaKnown RBP12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 GTF3C1Q12789 2109 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 ZGRF1Q86YA3 2104 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 C8orf88P0DMB2 117 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 NABP2Q9BQ15 211 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 ZNF581Q9P0T4 197 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 SAA2-SAA4A0A096LPE2 208 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 RD3LP0DJH9 198 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 SAA2P0DJI9 122 aaPredicted RBP12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 SGMS2Q8NHU3 365 aa12.98□□□□□ -0.33
PPFIA4-205ENST00000486360 ARL14EPLP0DKL9 152 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 TDGF1P13385 188 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 ZNF474Q6S9Z5 364 aaPredicted RBP12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 FA2HQ7L5A8 372 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 A0A0G2JNJ9 132 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 SEC14L6B5MCN3 397 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 DNASE2O00115 360 aaPredicted RBP12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 IGKV3-15P01624 115 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 PIP4P1Q86T03 277 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 STPG3Q8N7X2 389 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 Q9UFV3 132 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 SELLP14151 372 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 NPCDR1Q9BY65 106 aa12.97□□□□□ -0.33
PPFIA4-205ENST00000486360 IGKV3-7A0A075B6H7 116 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 RAMP3O60896 148 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 ACAA1P09110 424 aaPredicted RBP12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 HIST1H1EP10412 219 aaKnown RBP12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 CRISP2P16562 243 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 MRPL54Q6P161 138 aaKnown RBP12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 FXYD3Q14802 87 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 NCMAPQ5T1S8 102 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 BIVMQ86UB2 503 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 WDFY1Q8IWB7 410 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 WFIKKN1Q96NZ8 548 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 GGACTQ9BVM4 153 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 LYNX1G3V0Z9 82 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 LYNX1P0DP58 116 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 HIST1H1BP16401 226 aaKnown RBP12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 ZNF525Q8N782 197 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 FUT9Q9Y231 359 aa12.96□□□□□ -0.33
PPFIA4-205ENST00000486360 ZNF106Q9H2Y7 1883 aaKnown RBP12.96□□□□□ -0.34
PPFIA4-205ENST00000486360 MFAP4P55083 255 aa12.96□□□□□ -0.34
PPFIA4-205ENST00000486360 GATAD1Q8WUU5 269 aa12.96□□□□□ -0.34
PPFIA4-205ENST00000486360 C19orf24Q9BVV8 132 aa12.96□□□□□ -0.34
PPFIA4-205ENST00000486360 RBFOX2O43251 390 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■□ 22.1
PPFIA4-205ENST00000486360 SMIM17P0DL12 118 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 DUTP33316 252 aaKnown RBP12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 NTF4P34130 210 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 PMS2P11Q13670 270 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 RNASEKQ6P5S7 137 aaKnown RBP12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 BPIFA4PQ86YQ2 179 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 OR4D5Q8NGN0 318 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 FBXL15Q9H469 300 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 MLNRO43193 412 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 CCL19Q99731 98 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.95□□□□□ -0.349e-7■■■■■ 26.8
PPFIA4-205ENST00000486360 A8MXK9 166 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 PAX6P26367 422 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 SRD5A3Q9H8P0 318 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 CBLN4Q9NTU7 201 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 MSRB2Q9Y3D2 182 aa12.95□□□□□ -0.34
PPFIA4-205ENST00000486360 CDKN1AP38936 164 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 OR51G1Q8NGK1 321 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 RNF138Q8WVD3 245 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 IFI27L2Q9H2X8 130 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 NAGKQ9UJ70 344 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 CREBBPQ92793 2442 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 PGPA6NDG6 321 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 NPIPB11E5RHQ5 1161 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 ZNF253O75346 499 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 C5orf24Q7Z6I8 188 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 C1orf147Q96MC9 270 aaPredicted RBP12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 MS4A10Q96PG2 267 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 LCN2P80188 198 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 TFF3Q07654 80 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 Q6P435 159 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 PITPNC1Q9UKF7 332 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 TRBV6-6A0A0A6YYG2 114 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 IL6RP08887 468 aaPredicted RBP12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 PF4V1P10720 104 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 ZNF506Q5JVG8 444 aa12.94□□□□□ -0.34
PPFIA4-205ENST00000486360 CUL9Q8IWT3 2517 aa12.93□□□□□ -0.34
PPFIA4-205ENST00000486360 LOC102723971A0A1B0GUV8 181 aa12.93□□□□□ -0.34
PPFIA4-205ENST00000486360 IER3P46695 156 aa12.93□□□□□ -0.34
PPFIA4-205ENST00000486360 RSPO1Q2MKA7 263 aaPredicted RBP12.93□□□□□ -0.34
PPFIA4-205ENST00000486360 CD177Q8N6Q3 437 aa12.93□□□□□ -0.34
PPFIA4-205ENST00000486360 FAM169BQ8N8A8 192 aa12.93□□□□□ -0.34
PPFIA4-205ENST00000486360 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms