RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SFT2D1Q8WV19 159 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 LHX4Q969G2 390 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 FLYWCH2Q96CP2 140 aaKnown RBP9.73□□□□□ -0.85
PKP4-213ENST00000486254 HARBI1Q96MB7 349 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 AMMECR1Q9Y4X0 333 aaPredicted RBP9.73□□□□□ -0.85
PKP4-213ENST00000486254 OR51B2Q9Y5P1 312 aa9.73□□□□□ -0.85
PKP4-213ENST00000486254 CTXND1A0A1B0GTU2 59 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 SEC14L6B5MCN3 397 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 LIPFP07098 398 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 SAA1P0DJI8 122 aaPredicted RBP9.72□□□□□ -0.85
PKP4-213ENST00000486254 PPT1P50897 306 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 HLA-DRB5Q30154 266 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 ZNF787Q6DD87 383 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 TGIF2LXQ8IUE1 241 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 Q8N7P7 452 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 CLRN3Q8NCR9 226 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 OR1L8Q8NGR8 309 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 P2RX4Q99571 388 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 CLEC7AQ9BXN2 247 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 PLEKHA3Q9HB20 300 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 LSM4Q9Y4Z0 139 aaKnown RBP9.72□□□□□ -0.85
PKP4-213ENST00000486254 RFNGQ9Y644 331 aa9.72□□□□□ -0.85
PKP4-213ENST00000486254 IGHV2-26A0A0B4J1V2 119 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 LOC102723971A0A1B0GUV8 181 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 A6NNC1 897 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 M0R1W7 72 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 IFNA1P01562 189 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 SOD3P08294 240 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 BCL2P10415 239 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 OPRK1P41145 380 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 ERVFRD-1P60508 538 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 ZNF726P1Q15940 193 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 C2orf83Q53S99 150 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 C1orf122Q6ZSJ8 110 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 TMEM170AQ8WVE7 144 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 RNF5Q99942 180 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 PATZ1Q9HBE1 687 aaKnown RBP9.71□□□□□ -0.85
PKP4-213ENST00000486254 ZZEF1O43149 2961 aa9.71□□□□□ -0.85
PKP4-213ENST00000486254 PPIAL4CA0A0B4J2A2 164 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 A0A1W2PN81 502 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 MAP1LC3B2A6NCE7 125 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 SRRM4A7MD48 611 aaKnown RBP9.71□□□□□ -0.86
PKP4-213ENST00000486254 RRHO14718 337 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 PPIAL4GP0DN37 164 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 CHRNA7P36544 502 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 RPL8P62917 257 aaKnown RBP9.71□□□□□ -0.86
PKP4-213ENST00000486254 CCL20P78556 96 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 ICAM4Q14773 271 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 RHEBQ15382 184 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 ACOT6Q3I5F7 207 aaPredicted RBP9.71□□□□□ -0.86
PKP4-213ENST00000486254 ACSM6Q6P461 480 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 RPP25LQ8N5L8 163 aaKnown RBP9.71□□□□□ -0.86
PKP4-213ENST00000486254 KIR3DL3Q8N743 410 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 MAP1LC3BQ9GZQ8 125 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 NPVFQ9HCQ7 196 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 NDUFA4L2Q9NRX3 87 aa9.71□□□□□ -0.86
PKP4-213ENST00000486254 IGLV2-23P01705 113 aa9.7□□□□□ -0.86
PKP4-213ENST00000486254 SRP19P09132 144 aaKnown RBP9.7□□□□□ -0.86
PKP4-213ENST00000486254 VMA21Q3ZAQ7 101 aa9.7□□□□□ -0.86
PKP4-213ENST00000486254 SPINK9Q5DT21 86 aa9.7□□□□□ -0.86
PKP4-213ENST00000486254 SOHLH1Q5JUK2 328 aa9.7□□□□□ -0.86
PKP4-213ENST00000486254 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
PKP4-213ENST00000486254 RBMS3Q6XE24 437 aaKnown RBP9.7□□□□□ -0.86
PKP4-213ENST00000486254 MRPL41Q8IXM3 137 aaKnown RBP9.7□□□□□ -0.86
PKP4-213ENST00000486254 TEX45Q8NA69 505 aa9.7□□□□□ -0.86
PKP4-213ENST00000486254 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
PKP4-213ENST00000486254 TUBA4BQ9H853 241 aa9.7□□□□□ -0.86
PKP4-213ENST00000486254 ZNRD1Q9P1U0 126 aa9.7□□□□□ -0.86
PKP4-213ENST00000486254 TEX50A0A1B0GTY4 177 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 CYB5BO43169 146 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 IGKV1D-33P01593 117 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 IGKV1-33P01594 117 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 IFNA4P05014 189 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 MAS1LP35410 378 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 NPBWR1P48145 328 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 RAB31Q13636 194 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 FFAR4Q5NUL3 377 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 OR11H6Q8NGC7 330 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 CACNG8Q8WXS5 425 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 COMMD5Q9GZQ3 224 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 VSIRQ9H7M9 311 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 MANBALQ9NQG1 85 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 SLC39A9Q9NUM3 307 aa9.69□□□□□ -0.86
PKP4-213ENST00000486254 MED19A0JLT2 244 aaPredicted RBP9.68□□□□□ -0.86
PKP4-213ENST00000486254 FAM74A7A6NL05 159 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 LYNX1G3V0Z9 82 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 LY6LH3BQJ8 138 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 BUB1B-PAK6H3BSN5 160 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 CA2P00918 260 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 LYNX1P0DP58 116 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 GNLYP22749 145 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 ELLP55199 621 aaPredicted RBP9.68□□□□□ -0.86
PKP4-213ENST00000486254 FAM74A3Q4VXF1 159 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 OR4P4Q8NGL7 312 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 OR10G9Q8NGN4 311 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 OR10G7Q8NGN6 311 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 SSBP3Q9BWW4 388 aaPredicted RBP9.68□□□□□ -0.86
PKP4-213ENST00000486254 GGTLC1Q9BX51 225 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 SMCO4Q9NRQ5 59 aa9.68□□□□□ -0.86
PKP4-213ENST00000486254 VAX2Q9UIW0 290 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms