RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 SEC11CQ9BY50 192 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 FXYD6Q9H0Q3 95 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 GAL3ST2Q9H3Q3 398 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 AUNIPQ9H7T9 357 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 GNG8Q9UK08 70 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 TNFSF18Q9UNG2 199 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 SLC7A11Q9UPY5 501 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 V9GYS6 101 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 SORL1Q92673 2214 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 STARD9Q9P2P6 4700 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 KIAA2026Q5HYC2 2103 aa5.02□□□□□ -1.61
TMEM39A-209ENST00000486235 A0A0B4J2A0 478 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 A0A1B0GTI1 187 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 F8W036 122 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 LY6LH3BQJ8 138 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 DNASE2O00115 360 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 SLC33A1O00400 549 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 SLC17A2O00624 439 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 FGF16O43320 207 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 CYB5AP00167 134 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 IGHV3-7P01780 117 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 CD74P04233 296 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 RLN1P04808 185 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 FRMD6-AS1P0C7T7 363 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 PVALBP20472 110 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 BCL3P20749 454 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 NFYBP25208 207 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 CD34P28906 385 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 GLIPR1P48060 266 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 NPBWR2P48146 333 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 POU3F4P49335 361 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 PRRX1P54821 245 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 HTD2P86397 168 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 AESQ08117 197 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 DIAPH2-AS1Q14236 149 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 INSL4Q14641 139 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 KIR2DS1Q14954 304 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 RAB11BQ15907 218 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 ODF4Q2M2E3 257 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 RNF212Q495C1 297 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 CDNFQ49AH0 187 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 TP53I3Q53FA7 332 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 FAM27D1Q5T7N8 215 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 TMEM268Q5VZI3 342 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 ETFRF1Q6IPR1 90 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 STEAP1BQ6NZ63 245 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 TEX38Q6PEX7 206 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 DEGS2Q6QHC5 323 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 ALKAL2Q6UX46 152 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 HEPN1Q6WQI6 88 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 FOXRED2Q8IWF2 684 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 ZNF679Q8IYX0 411 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 COMMD1Q8N668 190 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 OR4C16Q8NGL9 310 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 THAP6Q8TBB0 222 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 GPX8Q8TED1 209 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 TBX5Q99593 518 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 TSNAXQ99598 290 aaKnown RBP5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 PHB2Q99623 299 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 ABHD14AQ9BUJ0 271 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 SHPKQ9UHJ6 478 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 OR52A1Q9UKL2 312 aa5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 AK6Q9Y3D8 172 aaKnown RBP5.01□□□□□ -1.61
TMEM39A-209ENST00000486235 TRBV6-7A0A0A0MS04 114 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 IGHV3-72A0A0B4J1Y9 119 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 A0A1W2PPI3 338 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 OR5H14A6NHG9 310 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 OOSP1A8MZH6 123 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 NPIPB11E5RHQ5 1161 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 GOSR2O14653 212 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 SRSF10O75494 262 aaKnown RBP5□□□□□ -1.61
TMEM39A-209ENST00000486235 RPP14O95059 124 aaKnown RBP5□□□□□ -1.61
TMEM39A-209ENST00000486235 RAB3DO95716 219 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 IGKV1D-33P01593 117 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 IGKV1-33P01594 117 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 IGHG2P01859 326 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 OR4E1P0C645 316 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 GTF2F2P13984 249 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 ANXA7P20073 488 aaKnown RBP5□□□□□ -1.61
TMEM39A-209ENST00000486235 PTGFRP43088 359 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 H2BFSP57053 126 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 RAB5BP61020 215 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 DEFA5Q01523 94 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 ARL6IP1Q15041 203 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 UBE2V2Q15819 145 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 LTC4SQ16873 150 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 LRRTM1Q86UE6 522 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 FAM58AQ8N1B3 248 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 NHLRC2Q8NBF2 726 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 DMBX1Q8NFW5 382 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 OR11H1Q8NG94 326 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 OR4D6Q8NGJ1 314 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 OR9G1Q8NH87 305 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 TMEM170AQ8WVE7 144 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 LEAP2Q969E1 77 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 BORCS8Q96FH0 119 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 CXorf58Q96LI9 332 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 NMES1Q9C002 83 aa5□□□□□ -1.61
TMEM39A-209ENST00000486235 MOB1AQ9H8S9 216 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms