RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 CCDC190Q86UF4 302 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 SLC25A42Q86VD7 318 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 MRPL41Q8IXM3 137 aaKnown RBP9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 CADM3Q8N126 398 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 CASTOR1Q8WTX7 329 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 RAX2Q96IS3 184 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 P2RX4Q99571 388 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 PRRT1Q99946 306 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 SLC2A9Q9NRM0 540 aa9.3□□□□□ -0.92
HLA-DOA-204ENST00000485901 I3L521 148 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 UPK2O00526 184 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 KRASP01116 189 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 TRGV3P03979 118 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 SERPINE2P07093 398 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 IL6RP08887 468 aaPredicted RBP9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 FGF2P09038 288 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR9G9P0C7N8 305 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 ETV6P41212 452 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 RPL27AP46776 148 aaKnown RBP9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 PIGPP57054 158 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 SURF2Q15527 256 aaPredicted RBP9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 ETV3LQ6ZN32 361 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 Q8N402 240 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 TTC9CQ8N5M4 171 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR11H1Q8NG94 326 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR4C16Q8NGL9 310 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR6Q1Q8NGQ2 317 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR1N2Q8NGR9 330 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 DUX3Q96PT4 197 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 GNB4Q9HAV0 340 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 TMEM140Q9NV12 185 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 COPZ2Q9P299 210 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 SCP2D1Q9UJQ7 156 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 U3KQK5 164 aa9.29□□□□□ -0.92
HLA-DOA-204ENST00000485901 C13orf42A0A1B0GVH6 325 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 MARCH11A6NNE9 402 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 SNAPC5O75971 98 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 CTSDP07339 412 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 APELAP0DMC3 54 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 PI3P19957 117 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 FAUP35544 74 aaKnown RBP9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 PPP5CP53041 499 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 AP3S2P59780 193 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 DEFB136Q30KP8 78 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 C10orf55Q5SWW7 151 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 FAAP20Q6NZ36 180 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 TOMM5Q8N4H5 51 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 ADAD2Q8NCV1 583 aaKnown RBP9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR13C8Q8NGS7 320 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 MARCH1Q8TCQ1 289 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 USMG5Q96IX5 58 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 SCGB3A2Q96PL1 93 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 FYTTD1Q96QD9 318 aaKnown RBP9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 OR5B12Q96R08 314 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 COMMD5Q9GZQ3 224 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 MCUBQ9NWR8 336 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 COA4Q9NYJ1 87 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 C14orf166Q9Y224 244 aaKnown RBP9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 V9GYH0 126 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 TNCP24821 2201 aa9.28□□□□□ -0.92
HLA-DOA-204ENST00000485901 C3orf85A0A1B0GTC6 90 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 HMX3A6NHT5 357 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 E7EUB6 86 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 B3GALNT1O75752 331 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 ATG12O94817 140 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 LGALS1P09382 135 aaKnown RBP9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 OR8U8P0C7N1 319 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 RPA2P15927 270 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 G6PCP35575 357 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 RAB25P57735 213 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 ZNF616Q08AN1 781 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 ZNF79Q15937 498 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 OR51S1Q8NGJ8 323 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 DEDD2Q8WXF8 326 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 TSC22D3Q99576 134 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 SLC2A8Q9NY64 477 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 FKBP11Q9NYL4 201 aa9.27□□□□□ -0.93
HLA-DOA-204ENST00000485901 TRAV3A0A0B4J244 114 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 TEX13DA0A0J9YY54 714 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 NPIPB5A8MRT5 1133 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 TEX22C9J3V5 150 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 H0Y980 276 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 DHFRP00374 187 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 IGHV3-11P01762 117 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 HSPB1P04792 205 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 HOXD3P31249 432 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 OR2B8PP59922 312 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 FHL3Q13643 280 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 GDPD1Q8N9F7 314 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 OR1L8Q8NGR8 309 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 MRGPRFQ96AM1 343 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 SRSF8Q9BRL6 282 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 RTBDNQ9BSG5 229 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 PRNDQ9UKY0 176 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 GPR132Q9UNW8 380 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 ZNF257Q9Y2Q1 563 aa9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 LSM4Q9Y4Z0 139 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-204ENST00000485901 FAM223BA6NKX1 122 aa9.25□□□□□ -0.93
HLA-DOA-204ENST00000485901 LINC01619G3V211 115 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms