RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 IGKV1-5P01602 117 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 PAX6P26367 422 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 CEACAM3P40198 252 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 AKR1C2P52895 323 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 TAGLNQ01995 201 aaKnown RBP9.1□□□□□ -0.95
SND1-212ENST00000485871 POU2AF1Q16633 256 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 FBLN7Q53RD9 439 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 FAM74A1Q5RGS3 127 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 RPL7L1Q6DKI1 246 aaKnown RBP9.1□□□□□ -0.95
SND1-212ENST00000485871 PDPNQ86YL7 162 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 PCNPQ8WW12 178 aaKnown RBP9.1□□□□□ -0.95
SND1-212ENST00000485871 TMED6Q8WW62 240 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 MALSU1Q96EH3 234 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 SMIM8Q96KF7 97 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 GINS3Q9BRX5 216 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 PRELID3BQ9Y3B1 194 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 STRAPQ9Y3F4 350 aaKnown RBP9.1□□□□□ -0.95
SND1-212ENST00000485871 WSB1Q9Y6I7 421 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
SND1-212ENST00000485871 IGHV3OR16-10A0A075B7F0 116 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 IGKV1-16P04430 117 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 IL6RP08887 468 aaPredicted RBP9.09□□□□□ -0.95
SND1-212ENST00000485871 M6PRP20645 277 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 MC5RP33032 325 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 EWSR1Q01844 656 aaKnown RBP eCLIP9.09□□□□□ -0.95
SND1-212ENST00000485871 SSX2Q16385 188 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 TMEM177Q53S58 311 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 DHRS7BQ6IAN0 325 aaPredicted RBP9.09□□□□□ -0.95
SND1-212ENST00000485871 BRD3OSQ6XYD6 125 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 STX12Q86Y82 276 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 OR4S2Q8NH73 311 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 GPR146Q96CH1 333 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 PARP11Q9NR21 331 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 WASHC3Q9Y3C0 194 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 HILPDAQ9Y5L2 63 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 MMP24Q9Y5R2 645 aa9.09□□□□□ -0.95
SND1-212ENST00000485871 SOX21Q9Y651 276 aaPredicted RBP9.09□□□□□ -0.95
SND1-212ENST00000485871 NSD1Q96L73 2696 aaPredicted RBP9.08□□□□□ -0.96
SND1-212ENST00000485871 IGHV3-72A0A0B4J1Y9 119 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 A0A0U1RQK1 487 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 ZNF705EA8MWA4 302 aaPredicted RBP9.08□□□□□ -0.96
SND1-212ENST00000485871 TRIM77I1YAP6 450 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 TIMM23O14925 209 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 KCNAB3O43448 404 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 SSSCA1O60232 199 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 DFFBO76075 338 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 VENTXO95231 258 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 CRYZL1O95825 349 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 IGLV2-23P01705 113 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 APOA2P02652 100 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 FAM157CP0CG43 387 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 EPHA1P21709 976 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 CD1BP29016 333 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 RAB13P51153 203 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 CAV2P51636 162 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 F2RL1P55085 397 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 LGALS4P56470 323 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 EBI3Q14213 229 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 RTL8BQ17RB0 113 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 TUSC1Q2TAM9 212 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 CCDC144NLQ6NUI1 221 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 Q6ZRM9 215 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 C9orf139Q6ZV77 190 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 MOB3BQ86TA1 216 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 R3HDM4Q96D70 268 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 GNPNAT1Q96EK6 184 aaPredicted RBP9.08□□□□□ -0.96
SND1-212ENST00000485871 MEGF9Q9H1U4 602 aa9.08□□□□□ -0.96
SND1-212ENST00000485871 STAB1Q9NY15 2570 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 SRRM4A7MD48 611 aaKnown RBP9.07□□□□□ -0.96
SND1-212ENST00000485871 UMAD1C9J7I0 102 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 SPP1P10451 314 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 G6PCP35575 357 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 BPIFB3P59826 476 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 POLR2GP62487 172 aaKnown RBP eCLIP9.07□□□□□ -0.96
SND1-212ENST00000485871 PJVKQ0ZLH3 352 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 IZUMO4Q1ZYL8 232 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 Q8N6K4 173 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 TMEM252Q8N6L7 170 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 OR4C13Q8NGP0 309 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 OR1S2Q8NGQ3 325 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 OSR1Q8TAX0 266 aaPredicted RBP9.07□□□□□ -0.96
SND1-212ENST00000485871 RITA1Q96K30 269 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 CACNG5Q9UF02 275 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 NBEAL1Q6ZS30 2694 aa9.07□□□□□ -0.96
SND1-212ENST00000485871 MARCH11A6NNE9 402 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 SYNGR2O43760 224 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 CHST1O43916 411 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 KRASP01116 189 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 CRYGBP07316 175 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 OR9G9P0C7N8 305 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 NQO2P16083 231 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 SULT1A1P50225 295 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 DYNLT3P51808 116 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 HBG1P69891 147 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 HBG2P69892 147 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 MRGPRG-AS1Q2M3A8 158 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 CXorf66Q5JRM2 361 aaPredicted RBP9.06□□□□□ -0.96
SND1-212ENST00000485871 VKORC1L1Q8N0U8 176 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 PUSL1Q8N0Z8 303 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms