RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 OR4D5Q8NGN0 318 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 OR5M8Q8NGP6 311 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 OR52E5Q8NH55 327 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 NDUFA4L2Q9NRX3 87 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.5□□□□□ -0.41
APOE-205ENST00000485628 CACNG5Q9UF02 275 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 NSG2Q9Y328 171 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 FBXO7Q9Y3I1 522 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 TEX50A0A1B0GTY4 177 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 SH2D7A6NKC9 451 aaPredicted RBP12.49□□□□□ -0.41
APOE-205ENST00000485628 IGF1P05019 195 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 MYOD1P15172 320 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 H2BFSP57053 126 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 ID3Q02535 119 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 Q6ZSV7 163 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 PRIMA1Q86XR5 153 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 OR11H7Q8NGC8 314 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 OR5B3Q8NH48 314 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 CHAC2Q8WUX2 184 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 QTRT1Q9BXR0 403 aaKnown RBP12.49□□□□□ -0.41
APOE-205ENST00000485628 NPFFR1Q9GZQ6 430 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 C16orf95Q9H693 158 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 FKBP11Q9NYL4 201 aa12.49□□□□□ -0.41
APOE-205ENST00000485628 TEX22C9J3V5 150 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 INS-IGF2F8WCM5 200 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 TRIM77I1YAP6 450 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 ST8SIA3O43173 380 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 NDUFA7O95182 113 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 IFNA21P01568 189 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 CXCL3P19876 107 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 HSPE1P61604 102 aaKnown RBP12.48□□□□□ -0.41
APOE-205ENST00000485628 RRAS2P62070 204 aaPredicted RBP12.48□□□□□ -0.41
APOE-205ENST00000485628 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 PRSS22Q9GZN4 317 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 HSPB7Q9UBY9 170 aa12.48□□□□□ -0.41
APOE-205ENST00000485628 FAM90A26D6RGX4 464 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 CCSO14618 274 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 SNAPC5O75971 98 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 FXYD3Q14802 87 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 FCN2Q15485 313 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 KLK9Q2XQG4 91 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 C10orf55Q5SWW7 151 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 ASPHD1Q5U4P2 390 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 ZBTB8BQ8NAP8 495 aaPredicted RBP12.47□□□□□ -0.41
APOE-205ENST00000485628 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 SGMS2Q8NHU3 365 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 WIPF2Q8TF74 440 aaPredicted RBP12.47□□□□□ -0.41
APOE-205ENST00000485628 C2orf50Q96LR7 162 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 SRSF8Q9BRL6 282 aaKnown RBP12.47□□□□□ -0.41
APOE-205ENST00000485628 SERTAD4Q9NUC0 356 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 CACFD1Q9UGQ2 172 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 KLK9Q9UKQ9 250 aa12.47□□□□□ -0.41
APOE-205ENST00000485628 A0A1B0GVG6 124 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 KCNAB3O43448 404 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 SSNA1O43805 119 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 PRCDQ00LT1 54 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 CFHR3Q02985 330 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 PLGLAQ15195 96 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 CXorf66Q5JRM2 361 aaPredicted RBP12.46□□□□□ -0.41
APOE-205ENST00000485628 UXS1Q8NBZ7 420 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 OR1L8Q8NGR8 309 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.41
APOE-205ENST00000485628 WDR89Q96FK6 387 aaPredicted RBP12.46□□□□□ -0.41
APOE-205ENST00000485628 FYTTD1Q96QD9 318 aaKnown RBP12.46□□□□□ -0.41
APOE-205ENST00000485628 SPIN2AQ99865 258 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 SPIN2BQ9BPZ2 258 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 WNT10AQ9GZT5 417 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 MED28Q9H204 178 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 OR51B2Q9Y5P1 312 aa12.46□□□□□ -0.41
APOE-205ENST00000485628 IGLC7A0M8Q6 106 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 ATP6V0E1O15342 81 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 PPIFP30405 207 aaKnown RBP12.45□□□□□ -0.42
APOE-205ENST00000485628 RPL27AP46776 148 aaKnown RBP12.45□□□□□ -0.42
APOE-205ENST00000485628 SPCS3P61009 180 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 SRSF2Q01130 221 aaKnown RBP12.45□□□□□ -0.42
APOE-205ENST00000485628 TNFRSF9Q07011 255 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 TNXAQ16473 311 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 IAH1Q2TAA2 248 aaPredicted RBP12.45□□□□□ -0.42
APOE-205ENST00000485628 AKIRIN2Q53H80 203 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 THOC7Q6I9Y2 204 aaKnown RBP12.45□□□□□ -0.42
APOE-205ENST00000485628 GSG1LQ6UXU4 331 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 SLC35E3Q7Z769 313 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 RNASE11Q8TAA1 199 aaKnown RBP12.45□□□□□ -0.42
APOE-205ENST00000485628 ARPC1AQ92747 370 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 TAF15Q92804 592 aaKnown RBP eCLIP12.45□□□□□ -0.42
APOE-205ENST00000485628 NMES1Q9C002 83 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 COMMD5Q9GZQ3 224 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 C11orf1Q9H5F2 150 aa12.45□□□□□ -0.42
APOE-205ENST00000485628 HMX3A6NHT5 357 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 MSGN1A6NI15 193 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 GOSR2O14653 212 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 SIX6O95475 246 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 CRYGCP07315 174 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 TRAPPC2P0DI81 140 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 TRAPPC2BP0DI82 140 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 HKR1P10072 659 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 VDAC2P45880 294 aaPredicted RBP12.44□□□□□ -0.42
APOE-205ENST00000485628 BSXQ3C1V8 233 aa12.44□□□□□ -0.42
APOE-205ENST00000485628 PVRIGQ6DKI7 326 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms