RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 GGTLC1Q9BX51 225 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 RPH3ALQ9UNE2 315 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 WASHC3Q9Y3C0 194 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 CHTOPQ9Y3Y2 248 aaKnown RBP9.82□□□□□ -0.84
VTI1A-205ENST00000483122 TTC28Q96AY4 2481 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 C5orf49A4QMS7 147 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 LMO7DNF2Z398 122 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 M0R2Z0 102 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 RAB29O14966 203 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 NGFP01138 241 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 HLA-DQA1P01909 254 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 TBR1Q16650 682 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 ZNF497Q6ZNH5 498 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 ZNF645Q8N7E2 425 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 MS4A5Q9H3V2 200 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 TECRQ9NZ01 308 aaKnown RBP9.81□□□□□ -0.84
VTI1A-205ENST00000483122 MUC3AQ02505 3323 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 CFAP54Q96N23 3096 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 MUC21A0A0G2JKD1 596 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 MUC21A0A140T8X8 626 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 NUDT3O95989 172 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 CGAP01215 116 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 SSTR5P35346 364 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 GNG4P50150 75 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 UBE2G1P62253 170 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 MUC21Q5SSG8 566 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 PRR27Q6MZM9 219 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 ZC2HC1AQ96GY0 325 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 PRRG4Q9BZD6 226 aa9.81□□□□□ -0.84
VTI1A-205ENST00000483122 A0A096LPE4 126 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 IGHV1OR15-9A0A0B4J2B8 117 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 A0A1W2PPZ6 126 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 C2orf70A6NJV1 201 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 CXCL13O43927 109 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 HSBP1O75506 76 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 CA1P00915 261 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-205ENST00000483122 OR10J4P0C629 311 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 USF1P22415 310 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-205ENST00000483122 GATA2P23769 480 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-205ENST00000483122 CRYBB3P26998 211 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 CA7P43166 264 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 RAC3P60763 192 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 EIF4EBP1Q13541 118 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-205ENST00000483122 BVES-AS1Q5T3Y7 98 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 MOB1BQ7L9L4 216 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 YRDCQ86U90 279 aaKnown RBP9.8□□□□□ -0.84
VTI1A-205ENST00000483122 MEGF9Q9H1U4 602 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 A0A1W2PR77 199 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 HELTA6NFD8 242 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 OR2H2O95918 312 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 LINC00869P0C866 280 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 CCL7P80098 99 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 SCCPDHQ8NBX0 429 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 OR52L2PQ8NGH6 319 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 C1orf159Q96HA4 380 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 AKIRIN1Q9H9L7 192 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-205ENST00000483122 CLEC5AQ9NY25 188 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 R4GN57 208 aa9.8□□□□□ -0.84
VTI1A-205ENST00000483122 GAGE12BA1L429 117 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 CDIPTO14735 213 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 SAP30O75446 220 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 OR9G9P0C7N8 305 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 PSG9Q00887 426 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 EFNB3Q15768 340 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 COX19Q49B96 90 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 SPACA3Q8IXA5 215 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 DEFB125Q8N687 156 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 IFI44Q8TCB0 444 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 OSTCQ9NRP0 149 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 SERTAD4Q9NUC0 356 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 MED12LQ86YW9 2145 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 FREM1Q5H8C1 2179 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 CEP192Q8TEP8 1941 aa9.79□□□□□ -0.84
VTI1A-205ENST00000483122 WISP2O76076 250 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
VTI1A-205ENST00000483122 IL19Q9UHD0 177 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 TRAV8-6A0A0B4J262 113 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 SMIM27A0A1W2PRY6 76 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 hDV102S1A0JD36 115 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 ZNF503-AS2A6NEH8 195 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 LINC00473A8K010 186 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 K7ERU9 68 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 MPDU1O75352 247 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 TOX4O94842 621 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 SP9P0CG40 484 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 NPY1RP25929 384 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 PRR31Q5SQ13 230 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 GDF5OSQ5U4N7 250 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 TMEM45BQ96B21 275 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 SARAFQ96BY9 339 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 POM121L2Q96KW2 1035 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 TNFRSF19Q9NS68 423 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 MBNL3Q9NUK0 354 aaKnown RBP9.78□□□□□ -0.84
VTI1A-205ENST00000483122 NCKAP5O14513 1909 aa9.78□□□□□ -0.84
VTI1A-205ENST00000483122 SH2D7A6NKC9 451 aaPredicted RBP9.77□□□□□ -0.84
VTI1A-205ENST00000483122 CIDEAO60543 219 aa9.77□□□□□ -0.84
VTI1A-205ENST00000483122 SCRG1O75711 98 aa9.77□□□□□ -0.84
VTI1A-205ENST00000483122 MGST1P10620 155 aaKnown RBP9.77□□□□□ -0.84
VTI1A-205ENST00000483122 RAC2P15153 192 aa9.77□□□□□ -0.84
VTI1A-205ENST00000483122 GPR6P46095 362 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms