RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 MIXL1Q9H2W2 232 aa10.68□□□□□ -0.7
VARS-225ENST00000482996 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
VARS-225ENST00000482996 ZNF257Q9Y2Q1 563 aa10.68□□□□□ -0.7
VARS-225ENST00000482996 HMX3A6NHT5 357 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 TEX22C9J3V5 150 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 GPR31O00270 319 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 RLN1P04808 185 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 IL6RP08887 468 aaPredicted RBP10.67□□□□□ -0.7
VARS-225ENST00000482996 HLA-GP17693 338 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 ETV6P41212 452 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 PPP5CP53041 499 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 ERVK-16P61578 105 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 ATP5G2Q06055 141 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 POU2AF1Q16633 256 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 TATDN3Q17R31 274 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 TRIQKQ629K1 86 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 LPCAT3Q6P1A2 487 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 NECAP1Q8NC96 275 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 DMBX1Q8NFW5 382 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 FXYD6Q9H0Q3 95 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 PLEKHA2Q9HB19 425 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 SLC2A9Q9NRM0 540 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 COMMD9Q9P000 198 aa10.67□□□□□ -0.7
VARS-225ENST00000482996 TRBV9A0A0B4J1U6 114 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 NPIPB5A8MRT5 1133 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 PGLYRP1O75594 196 aaPredicted RBP10.66□□□□□ -0.7
VARS-225ENST00000482996 TPPPO94811 219 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 S1PR2O95136 353 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 DHFRP00374 187 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 PRH1P02810 166 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 ZNF735P0CB33 412 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 F2RP25116 425 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 EXOSC2Q13868 293 aaKnown RBP10.66□□□□□ -0.7
VARS-225ENST00000482996 FAM209BQ5JX69 171 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 B9D2Q9BPU9 175 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 CCDC32Q9BV29 185 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 DNAH9Q9NYC9 4486 aa10.66□□□□□ -0.7
VARS-225ENST00000482996 UPK2O00526 184 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 RBMXL2O75526 392 aaKnown RBP10.65□□□□□ -0.7
VARS-225ENST00000482996 OR2J3O76001 311 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 MRPS10P82664 201 aaKnown RBP10.65□□□□□ -0.7
VARS-225ENST00000482996 KLF5Q13887 457 aaPredicted RBP10.65□□□□□ -0.7
VARS-225ENST00000482996 RPEL1Q2QD12 228 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 GDPD1Q8N9F7 314 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 RSRP1Q9BUV0 290 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 COMMD5Q9GZQ3 224 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 PALMDQ9NP74 551 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 TMEM140Q9NV12 185 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
VARS-225ENST00000482996 V9GYH0 126 aa10.65□□□□□ -0.7
VARS-225ENST00000482996 E7EUB6 86 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 IFNA6P05013 189 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 FGF2P09038 288 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 HIST1H1BP16401 226 aaKnown RBP10.64□□□□□ -0.71
VARS-225ENST00000482996 PSMB6P28072 239 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 LPAR6P43657 344 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 SYNJ2BPP57105 145 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 DEFA1P59665 94 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 DEFA3P59666 94 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 C15orf32Q32M92 178 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 PHLDA2Q53GA4 152 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 RNASE12Q5GAN4 147 aaKnown RBP10.64□□□□□ -0.71
VARS-225ENST00000482996 VAX1Q5SQQ9 334 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 OR9G4Q8NGQ1 327 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 FBXL7Q9UJT9 491 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 COL7A1Q02388 2944 aa10.64□□□□□ -0.71
VARS-225ENST00000482996 A0A1B0GW64 132 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 MARCH11A6NNE9 402 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 M0QYG6 137 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 CRYGCP07315 174 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 DEFA4P12838 97 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 MYOD1P15172 320 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 AREGP15514 252 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 RPA2P15927 270 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 SPNP16150 400 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 CTRB1P17538 263 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 TBPP20226 339 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 UCP3P55916 312 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 OR2B8PP59922 312 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 RNASE10Q5GAN6 216 aaKnown RBP10.63□□□□□ -0.71
VARS-225ENST00000482996 CTRB2Q6GPI1 263 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 SLC38A6Q8IZM9 456 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 Q8N402 240 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 OR52I2Q8NH67 350 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 SRSF8Q9BRL6 282 aaKnown RBP10.63□□□□□ -0.71
VARS-225ENST00000482996 QTRT1Q9BXR0 403 aaKnown RBP10.63□□□□□ -0.71
VARS-225ENST00000482996 SRRQ9GZT4 340 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 KLK11Q9UBX7 282 aa10.63□□□□□ -0.71
VARS-225ENST00000482996 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.62□□□□□ -0.71
VARS-225ENST00000482996 TRAV3A0A0B4J244 114 aa10.62□□□□□ -0.71
VARS-225ENST00000482996 SNAPC5O75971 98 aa10.62□□□□□ -0.71
VARS-225ENST00000482996 KRASP01116 189 aa10.62□□□□□ -0.71
VARS-225ENST00000482996 GP9P14770 177 aa10.62□□□□□ -0.71
VARS-225ENST00000482996 THOC7Q6I9Y2 204 aaKnown RBP10.62□□□□□ -0.71
VARS-225ENST00000482996 FCAMRQ8WWV6 532 aa10.62□□□□□ -0.71
VARS-225ENST00000482996 ABHD1Q96SE0 405 aa10.62□□□□□ -0.71
VARS-225ENST00000482996 FAM212BQ9NTI7 297 aaPredicted RBP10.62□□□□□ -0.71
VARS-225ENST00000482996 PEMTQ9UBM1 199 aa10.62□□□□□ -0.71
VARS-225ENST00000482996 MTFP1Q9UDX5 166 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms