RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 C15orf61A6NNL5 157 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 UPK2O00526 184 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 SLC25A17O43808 307 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 CHST1O43916 411 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 KBTBD11O94819 623 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 MOSP00540 346 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 IGKV1D-33P01593 117 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 IGKV1-33P01594 117 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 P0C879 139 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 IAPPP10997 89 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 S100A11P31949 105 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 SPCS3P61009 180 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 RPP30P78346 268 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 RELBQ01201 579 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 ZNF345Q14585 488 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 LGALSLQ3ZCW2 172 aaPredicted RBP10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 TMUB2Q71RG4 321 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 STX12Q86Y82 276 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 MRPL41Q8IXM3 137 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 TEX29Q8N6K0 151 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 DTD1Q8TEA8 209 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 HINT2Q9BX68 163 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 COMMD5Q9GZQ3 224 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 PSENENQ9NZ42 101 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 HSPB7Q9UBY9 170 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 PAIP2BQ9ULR5 123 aaKnown RBP10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 FOXA2Q9Y261 457 aaPredicted RBP10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 OR51B2Q9Y5P1 312 aa10.04□□□□□ -0.8
TSPAN1-208ENST00000482928 VENTXO95231 258 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 SPDEFO95238 335 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 SNRNP70P08621 437 aaKnown RBP10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 TMEM11P17152 192 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 CXCL2P19875 107 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 F2RL1P55085 397 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 RPL8P62917 257 aaKnown RBP10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 HNF4GQ14541 408 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 OPCMLQ14982 345 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 MMDQ15546 238 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 RUSC1-AS1Q66K80 236 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 ZNF429Q86V71 674 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 KRTAP1-3Q8IUG1 177 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 PUSL1Q8N0Z8 303 aaKnown RBP10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 KCNRGQ8N5I3 272 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 OR2C3Q8N628 320 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 OR52E5Q8NH55 327 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 AQP10Q96PS8 301 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 ARPC5LQ9BPX5 153 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 HEYLQ9NQ87 328 aaPredicted RBP10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 PLSCR3Q9NRY6 295 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 METTL1Q9UBP6 276 aaKnown RBP10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 BOLA1Q9Y3E2 137 aa10.03□□□□□ -0.8
TSPAN1-208ENST00000482928 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.8
TSPAN1-208ENST00000482928 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 NBR2O15453 112 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 BCL2L11O43521 198 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 FBP1P09467 338 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 TAS2R30P59541 319 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 BPIFB3P59826 476 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 PSG5Q15238 335 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 MMD2Q8IY49 270 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 OR5B3Q8NH48 314 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 TMEM167AQ8TBQ9 72 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 PLEKHA3Q9HB20 300 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 LYRM2Q9NU23 88 aaPredicted RBP10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 C1RLQ9NZP8 487 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 TCF19Q9Y242 345 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 ZNF257Q9Y2Q1 563 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 STRAPQ9Y3F4 350 aaKnown RBP10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 WSB1Q9Y6I7 421 aa10.02□□□□□ -0.81
TSPAN1-208ENST00000482928 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 FAM24AA6NFZ4 105 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 NCBP2LA6PVI3 153 aaKnown RBP10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 H3BP45 60 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 TAAR5O14804 337 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 SCAF4O95104 1147 aaKnown RBP10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 IGHV4-38-2P0DP08 117 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 HKR1P10072 659 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 GNB1P62873 340 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 EIF5AP63241 154 aaKnown RBP10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 BAXQ07812 192 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 KRTAP24-1Q3LI83 254 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 SPANXN5Q5MJ07 72 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 LAMTOR1Q6IAA8 161 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 OR1L8Q8NGR8 309 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 NANPQ8TBE9 248 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 CFHR4Q92496 578 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 EAF1Q96JC9 268 aaPredicted RBP10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 SMIM8Q96KF7 97 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 ZNF471Q9BX82 626 aaPredicted RBP10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 GON7Q9BXV9 100 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 SLA2Q9H6Q3 261 aa10.01□□□□□ -0.81
TSPAN1-208ENST00000482928 TMEM14BQ9NUH8 114 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms