RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 Q6ZR54 194 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 PUSL1Q8N0Z8 303 aaKnown RBP10.83□□□□□ -0.68
HDAC6-224ENST00000481929 PHYHIPQ92561 330 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 TMEM80Q96HE8 168 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 ETV7Q9Y603 341 aa10.83□□□□□ -0.68
HDAC6-224ENST00000481929 IGHV3OR16-8A0A075B7F1 116 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 DEFB131BA0A096LNP1 70 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 OR2T8A6NH00 312 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 K7EMT4 169 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 ATP8B1O43520 1251 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 IFNA10P01566 189 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 FCGR3AP08637 254 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 RPL8P62917 257 aaKnown RBP10.82□□□□□ -0.68
HDAC6-224ENST00000481929 INSL4Q14641 139 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 P2RY14Q15391 338 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 UBE2DNLQ8IWF7 75 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 OR4S2Q8NH73 311 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 PYDC1Q8WXC3 89 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 BSCL2Q96G97 398 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-224ENST00000481929 RNF2Q99496 336 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 CHRDL1Q9BU40 450 aa10.82□□□□□ -0.68
HDAC6-224ENST00000481929 IGKV3-7A0A075B6H7 116 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 RAB27BO00194 218 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 CDK1P06493 297 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 CD36P16671 472 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 ACSM3Q53FZ2 586 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 PLAC9Q5JTB6 97 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 SPSB3Q6PJ21 355 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 H1FOOQ8IZA3 346 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-224ENST00000481929 OR56B1Q8NGI3 324 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 VN1R17PQ8TDU5 208 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 CMTM3Q96MX0 182 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 SMPXQ9UHP9 88 aa10.81□□□□□ -0.68
HDAC6-224ENST00000481929 CGB1A6NKQ9 187 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 C15orf62A8K5M9 175 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 J3QRK9 145 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 CYB5BO43169 146 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 IFNA21P01568 189 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 IFNA17P01571 189 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 HLA-GP17693 338 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 RPL30P62888 115 aaKnown RBP10.8□□□□□ -0.68
HDAC6-224ENST00000481929 SSX1Q16384 188 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 C1orf134Q5TEV5 83 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 LIPKQ5VXJ0 399 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 Q6ZRM9 215 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 MAFIPQ8WZ33 124 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 RHPN1-AS1Q9BWJ2 59 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 PLGRKTQ9HBL7 147 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 SCRT2Q9NQ03 307 aa10.8□□□□□ -0.68
HDAC6-224ENST00000481929 ELOA3CA0A087WX78 387 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-224ENST00000481929 IGHV7-4-1A0A0J9YVY3 117 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 EFCAB10A6NFE3 127 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 CD37P11049 281 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 HSD17B12Q53GQ0 312 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 TMEM41BQ5BJD5 291 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 GBGT1Q8N5D6 347 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 TCTEX1D2Q8WW35 142 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 CENPOQ9BU64 300 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 C9orf16Q9BUW7 83 aa10.79□□□□□ -0.68
HDAC6-224ENST00000481929 RBMX2Q9Y388 322 aaKnown RBP10.79□□□□□ -0.68
HDAC6-224ENST00000481929 IGLC7A0M8Q6 106 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 ZNF705EA8MWA4 302 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-224ENST00000481929 CHEK1O14757 476 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 MYL12BO14950 172 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 CIB2O75838 187 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 HRASP01112 189 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 WNT4P56705 351 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 OR2B8PP59922 312 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 PAFAH1B2P68402 229 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 STHQ8IWL8 128 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 TMEM116Q8NCL8 245 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 SMPD3Q9NY59 655 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-224ENST00000481929 CELA1Q9UNI1 258 aa10.78□□□□□ -0.68
HDAC6-224ENST00000481929 LRP1BQ9NZR2 4599 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 IGHV3-49A0A0A0MS15 119 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 SLC17A2O00624 439 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 SLC22A5O76082 557 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 CD74P04233 296 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 DEFB131AP59861 70 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 ST3GAL4Q11206 333 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 RAB11BQ15907 218 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 C12orf74Q32Q52 190 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 LEMD1Q68G75 181 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 ZNF767PQ75MW2 155 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 MS4A15Q8N5U1 240 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 ZNF555Q8NEP9 628 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 RAB3CQ96E17 227 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 ATP6V0BQ99437 205 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 HSD17B10Q99714 261 aaKnown RBP10.77□□□□□ -0.69
HDAC6-224ENST00000481929 SRSF8Q9BRL6 282 aaKnown RBP10.77□□□□□ -0.69
HDAC6-224ENST00000481929 HRASLSQ9HDD0 168 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 C21orf62Q9NYP8 219 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 KCNK7Q9Y2U2 307 aa10.77□□□□□ -0.69
HDAC6-224ENST00000481929 DFFBO76075 338 aa10.76□□□□□ -0.69
HDAC6-224ENST00000481929 RASSF2P50749 326 aa10.76□□□□□ -0.69
HDAC6-224ENST00000481929 PLA2G7Q13093 441 aa10.76□□□□□ -0.69
HDAC6-224ENST00000481929 GDPD1Q8N9F7 314 aa10.76□□□□□ -0.69
HDAC6-224ENST00000481929 UBAC2Q8NBM4 344 aa10.76□□□□□ -0.69
HDAC6-224ENST00000481929 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
HDAC6-224ENST00000481929 BET1LQ9NYM9 111 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms