RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 TEPPQ6URK8 271 aa11.91□□□□□ -0.5
CCDC78-211ENST00000481804 PLEKHA3Q9HB20 300 aa11.91□□□□□ -0.5
CCDC78-211ENST00000481804 RP1L1Q8IWN7 2480 aaPredicted RBP11.91□□□□□ -0.5
CCDC78-211ENST00000481804 TRAV3A0A0B4J244 114 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 FOXH1O75593 365 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 CGAP01215 116 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 BRS3P32247 399 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.5
CCDC78-211ENST00000481804 FXYD3Q14802 87 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 EFNB3Q15768 340 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 DOLPP1Q86YN1 238 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 WDR31Q8NA23 367 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 EAF1Q96JC9 268 aaPredicted RBP11.9□□□□□ -0.5
CCDC78-211ENST00000481804 TBL2Q9Y4P3 447 aaKnown RBP11.9□□□□□ -0.5
CCDC78-211ENST00000481804 IQCF6A8MYZ5 107 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 ZNF253O75346 499 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 MGST1P10620 155 aaKnown RBP11.9□□□□□ -0.5
CCDC78-211ENST00000481804 LINC00310P59036 64 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 PSG5Q15238 335 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 ZNF766Q5HY98 468 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 GNB4Q9HAV0 340 aa11.9□□□□□ -0.5
CCDC78-211ENST00000481804 HELTA6NFD8 242 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 NTF3P20783 257 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 COL8A2P25067 703 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 LGALS4P56470 323 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 TIGITQ495A1 244 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 CENPWQ5EE01 88 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 COL5A1-AS1Q5SY13 56 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 CXXC4Q9H2H0 198 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 TMEM140Q9NV12 185 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 TCF19Q9Y242 345 aa11.9□□□□□ -0.51
CCDC78-211ENST00000481804 ICE1Q9Y2F5 2266 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 KLRC4-KLRK1H3BQV0 150 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 OR7C2O60412 319 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 GFRA3O60609 400 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 ADH4P08319 380 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 MRPL54Q6P161 138 aaKnown RBP11.89□□□□□ -0.51
CCDC78-211ENST00000481804 PQLC2Q6ZP29 291 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 OR4B1Q8NGF8 309 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 STARD4Q96DR4 205 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 FBXL7Q9UJT9 491 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 CBY1Q9Y3M2 126 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 AGFG2O95081 481 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 NPY1RP25929 384 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 CRYBB3P26998 211 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 ZNF718Q3SXZ3 478 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 SPATA45Q537H7 98 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 TMEM105Q8N8V8 129 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 CNEP1R1Q8N9A8 125 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 ST6GALNAC3Q8NDV1 305 aa11.89□□□□□ -0.51
CCDC78-211ENST00000481804 KLF13Q9Y2Y9 288 aaPredicted RBP11.89□□□□□ -0.51
CCDC78-211ENST00000481804 J3QW42 95 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 YPEL1O60688 119 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 C11orf42Q8N5U0 333 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 LRRC29Q8WV35 223 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 YPEL2Q96QA6 119 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
CCDC78-211ENST00000481804 CHODLQ9H9P2 273 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 WDR82Q6UXN9 313 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
CCDC78-211ENST00000481804 RNF2Q99496 336 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 NRN1Q9NPD7 142 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 BDP1A6H8Y1 2624 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 SIAH2O43255 324 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 SP1P08047 785 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 Q6ZN92 141 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 SLC24A4Q8NFF2 622 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 FAM216AQ8WUB2 273 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 TTC28Q96AY4 2481 aa11.88□□□□□ -0.51
CCDC78-211ENST00000481804 TRGV5A0A0B4J1U4 118 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 TCF21O43680 179 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 RAB7AP51149 207 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 MMDQ15546 238 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 MIR17HGQ75NE6 70 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 HEATR1Q9H583 2144 aaKnown RBP11.87□□□□□ -0.51
CCDC78-211ENST00000481804 GPX1P07203 203 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 IGFBP2P18065 325 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 SRIP30626 198 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 VDAC2P45880 294 aaPredicted RBP11.87□□□□□ -0.51
CCDC78-211ENST00000481804 HNRNPA3P51991 378 aaKnown RBP11.87□□□□□ -0.51
CCDC78-211ENST00000481804 LEAP2Q969E1 77 aa11.87□□□□□ -0.51
CCDC78-211ENST00000481804 TRGV10A0A0A0MS01 117 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 TRBV9A0A0B4J1U6 114 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 TNFSF15O95150 251 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 CHRNB4P30926 498 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 Q0VG73 95 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 GNB1LQ9BYB4 327 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 PPP1R14DQ9NXH3 145 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 PPIAL4AQ9Y536 164 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 C9JCJ5 164 aa11.86□□□□□ -0.51
CCDC78-211ENST00000481804 MT-ND6P03923 174 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms