RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 S100GP29377 79 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 ELLP55199 621 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-208ENST00000481484 TAS2R31P59538 309 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 TAS2R46P59540 309 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 CD81P60033 236 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 ERVK-16P61578 105 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 RPL8P62917 257 aaKnown RBP3.15□□□□□ -1.91
VPS13D-208ENST00000481484 ATP5G2Q06055 141 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 ICAM4Q14773 271 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 POU2AF1Q16633 256 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 C15orf32Q32M92 178 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 KCTD21Q4G0X4 260 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 FAM106AQ4KMX7 169 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 IGSF11Q5DX21 431 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 C22orf42Q6IC83 251 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF773Q6PK81 442 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 SBSPONQ8IVN8 264 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 PUSL1Q8N0Z8 303 aaKnown RBP3.15□□□□□ -1.91
VPS13D-208ENST00000481484 CADM3Q8N126 398 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 TTC9CQ8N5M4 171 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 OR13F1Q8NGS4 319 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 LGALS14Q8TCE9 139 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 NUDCD2Q8WVJ2 157 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 TCTEX1D2Q8WW35 142 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 C5orf30Q96GV9 206 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 CNBD2Q96M20 576 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 MS4A10Q96PG2 267 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 FYTTD1Q96QD9 318 aaKnown RBP3.15□□□□□ -1.91
VPS13D-208ENST00000481484 OR2A7Q96R45 310 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 ASCL2Q99929 193 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 ATG5Q9H1Y0 275 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 OR51E2Q9H255 320 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 EDA2RQ9HAV5 297 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 AKIP1Q9NQ31 210 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 FAM212BQ9NTI7 297 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-208ENST00000481484 GAR1Q9NY12 217 aaKnown RBP3.15□□□□□ -1.91
VPS13D-208ENST00000481484 NKX1-2Q9UD57 310 aaPredicted RBP3.15□□□□□ -1.91
VPS13D-208ENST00000481484 SSR3Q9UNL2 185 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 CEPT1Q9Y6K0 416 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.91
VPS13D-208ENST00000481484 MSGN1A6NI15 193 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 C2orf70A6NJV1 201 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 TEX22C9J3V5 150 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF561-AS1K7EIQ3 104 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 SCGB2A1O75556 95 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 NDUFB8O95169 186 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 PPYP01298 95 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 CRYGCP07315 174 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 CSN3P07498 182 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 NQO2P16083 231 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 CTRB1P17538 263 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 HLA-GP17693 338 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 BMI1P35226 326 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 ARL3P36405 182 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 OR10A3P58181 314 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 HERV-K104P61576 105 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 PJVKQ0ZLH3 352 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 CDNFQ49AH0 187 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 CTRB2Q6GPI1 263 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 SPSB3Q6PJ21 355 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 HOGA1Q86XE5 327 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 GPHB5Q86YW7 130 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 GDPD1Q8N9F7 314 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 BEST4Q8NFU0 473 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 OR5T1Q8NG75 326 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 OR1L6Q8NGR2 347 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 CASTOR1Q8WTX7 329 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 NRG4Q8WWG1 115 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 BSCL2Q96G97 398 aaPredicted RBP3.14□□□□□ -1.91
VPS13D-208ENST00000481484 TSC22D3Q99576 134 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 SPAG8Q99932 426 aaPredicted RBP3.14□□□□□ -1.91
VPS13D-208ENST00000481484 FAM110AQ9BQ89 295 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 NEURL2Q9BR09 285 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 DCUN1D5Q9BTE7 237 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 QTRT1Q9BXR0 403 aaKnown RBP3.14□□□□□ -1.91
VPS13D-208ENST00000481484 COMMD5Q9GZQ3 224 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 TMPRSS5Q9H3S3 457 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 PLEKHA2Q9HB19 425 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 IFT46Q9NQC8 304 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 DIABLOQ9NR28 239 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 SLC2A9Q9NRM0 540 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 TXNL4BQ9NX01 149 aaKnown RBP3.14□□□□□ -1.91
VPS13D-208ENST00000481484 DAPK2Q9UIK4 370 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 UFC1Q9Y3C8 167 aa3.14□□□□□ -1.91
VPS13D-208ENST00000481484 DNAH6Q9C0G6 4158 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 IGLV11-55A0A075B6I3 123 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 IGKV1D-13A0A0B4J2D9 117 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM213A2RRL7 107 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 MARCH11A6NNE9 402 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 SRRM4A7MD48 611 aaKnown RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 HPRT1P00492 218 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 TRBV12-3P01733 135 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 CD5P06127 495 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 IGKV1-13P0DP09 117 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 DEFA4P12838 97 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 FOLR2P14207 255 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 NFYAP23511 347 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 MECP2P51608 486 aaKnown RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 APOC4P55056 127 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF45Q02386 682 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms