RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 OR4A47Q6IF82 309 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 LAX1Q8IWV1 398 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 SPAG16Q8N0X2 631 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 FAM110AQ9BQ89 295 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 SLC5A7Q9GZV3 580 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 WFDC10AQ9H1F0 79 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 DMRT1Q9Y5R6 373 aa11.52□□□□□ -0.57
LIMS3-203ENST00000480744 ZNF320A2RRD8 509 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 ZNF785A8K8V0 405 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 PPYP01298 95 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 HLA-GP17693 338 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 SPCS2Q15005 226 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 HOGA1Q86XE5 327 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 CLVS1Q8IUQ0 354 aaPredicted RBP11.51□□□□□ -0.57
LIMS3-203ENST00000480744 CACNG8Q8WXS5 425 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 EEF1AKMT3Q96AZ1 226 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 WDR89Q96FK6 387 aaPredicted RBP11.51□□□□□ -0.57
LIMS3-203ENST00000480744 CCDC140Q96MF4 163 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 FANCD2OSQ96PS1 177 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
LIMS3-203ENST00000480744 CSMD3Q7Z407 3707 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 MEIS3P1A6NDR6 274 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 SULT1C2O00338 296 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 CRYGCP07315 174 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 HIST1H1BP16401 226 aaKnown RBP11.5□□□□□ -0.57
LIMS3-203ENST00000480744 RPL5P46777 297 aaKnown RBP11.5□□□□□ -0.57
LIMS3-203ENST00000480744 CATR1Q13166 79 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 TMEM17Q86X19 198 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 CROCCP3Q8IVE0 287 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 AIFM2Q9BRQ8 373 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 HIPK2Q9H2X6 1198 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 AUNIPQ9H7T9 357 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 ZC4H2Q9NQZ6 224 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 DIABLOQ9NR28 239 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 BET1LQ9NYM9 111 aa11.5□□□□□ -0.57
LIMS3-203ENST00000480744 TECRQ9NZ01 308 aaKnown RBP11.5□□□□□ -0.57
LIMS3-203ENST00000480744 OR11H12B2RN74 326 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 LGALS9O00182 355 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 TMEM127O75204 238 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 EIF4EP06730 217 aaKnown RBP11.49□□□□□ -0.57
LIMS3-203ENST00000480744 CTRB1P17538 263 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 CBLN1P23435 193 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 MSMO1Q15800 293 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 UBE2NLQ5JXB2 153 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 CTRB2Q6GPI1 263 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 GPHB5Q86YW7 130 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 SAMD12Q8N8I0 201 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 ZBTB34Q8NCN2 500 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 OR51H1Q8NH63 302 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 OR4A5Q8NH83 315 aa11.49□□□□□ -0.57
LIMS3-203ENST00000480744 A0A0A6YYH2 397 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 RBMY1BA6NDE4 496 aaKnown RBP11.48□□□□□ -0.57
LIMS3-203ENST00000480744 RBMY1EA6NEQ0 496 aaKnown RBP11.48□□□□□ -0.57
LIMS3-203ENST00000480744 MFSD2BA6NFX1 497 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 A6NJ64 397 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 CGB1A6NKQ9 187 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 RBMY1DP0C7P1 496 aaKnown RBP11.48□□□□□ -0.57
LIMS3-203ENST00000480744 RPA2P15927 270 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 CBX5P45973 191 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 TAS2R31P59538 309 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 OR2B8PP59922 312 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 HERV-K104P61576 105 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 AADACL3Q5VUY0 350 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 ZNF57Q68EA5 555 aaPredicted RBP11.48□□□□□ -0.57
LIMS3-203ENST00000480744 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
LIMS3-203ENST00000480744 DMBX1Q8NFW5 382 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 LYSTQ99698 3801 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 COMMD5Q9GZQ3 224 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 IFT46Q9NQC8 304 aa11.48□□□□□ -0.57
LIMS3-203ENST00000480744 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 TRBV7-1A0A0A6YYK4 115 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 TRAV3A0A0B4J244 114 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 TMEM213A2RRL7 107 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 UPK2O00526 184 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 RBFOX2O43251 390 aaKnown RBP eCLIP11.47□□□□□ -0.57
LIMS3-203ENST00000480744 S1PR2O95136 353 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 HPRT1P00492 218 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 NQO2P16083 231 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 ZNF818PQ6ZRF7 136 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 SLC16A13Q7RTY0 426 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 TMEM61Q8N0U2 210 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 UXS1Q8NBZ7 420 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 OR5AP2Q8NGF4 316 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 CXorf58Q96LI9 332 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 TMEM140Q9NV12 185 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 EHFQ9NZC4 300 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 COMMD3Q9UBI1 195 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 MLXQ9UH92 298 aa11.47□□□□□ -0.57
LIMS3-203ENST00000480744 IGHV3-35A0A0C4DH35 117 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 H3BMQ9 156 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 XRCC3O43542 346 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 HPGDSO60760 199 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 SCAF4O95104 1147 aaKnown RBP11.46□□□□□ -0.57
LIMS3-203ENST00000480744 CLEC3BP05452 202 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 ELK1P19419 428 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 GPR183P32249 361 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 RORCP51449 518 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 TMBIM6P55061 237 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms