RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 IQSEC2Q5JU85 1478 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 CELSR1Q9NYQ6 3014 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 LRPPRCP42704 1394 aaKnown RBP0.87□□□□□ -2.27
CALD1-219ENST00000480638 SMLR1H3BR10 107 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 YKT6O15498 198 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 ATP6V1G2O95670 118 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 PRB4P10163 310 aaPredicted RBP0.87□□□□□ -2.27
CALD1-219ENST00000480638 AP1S1P61966 158 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 Q8N2B8 174 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 C9orf163Q8N9P6 203 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 SPERTQ8NA61 448 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 RAB2BQ8WUD1 216 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 ODF3Q96PU9 254 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 ZNHIT6Q9NWK9 470 aaKnown RBP0.87□□□□□ -2.27
CALD1-219ENST00000480638 LOC400499M0QZD8 3231 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 BSNQ9UPA5 3926 aa0.87□□□□□ -2.27
CALD1-219ENST00000480638 RIF1Q5UIP0 2472 aaKnown RBP0.87□□□□□ -2.27
CALD1-219ENST00000480638 SNAPC4Q5SXM2 1469 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 FAT4Q6V0I7 4981 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 FSIP2Q5CZC0 6907 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 A0A1W2PP64 1363 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 SPTA1P02549 2419 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 NIPBLQ6KC79 2804 aaeCLIP0.86□□□□□ -2.27
CALD1-219ENST00000480638 MEGF8Q7Z7M0 2845 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 ZANQ9Y493 2812 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 HEATR5BQ9P2D3 2071 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 TRAV38-1A0A0B4J264 116 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 TEX50A0A1B0GTY4 177 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 LINC00854A0A1B0GVQ3 168 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 TOX3O15405 576 aaPredicted RBP0.86□□□□□ -2.27
CALD1-219ENST00000480638 ORC5O43913 435 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 STX10O60499 249 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 ORM1P02763 201 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 ALDH3A1P30838 453 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 EVX1P49640 407 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 RAB14P61106 215 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 AKR1C1Q04828 323 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 EBPQ15125 230 aaKnown RBP0.86□□□□□ -2.27
CALD1-219ENST00000480638 ELOBQ15370 118 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 LRRC75BQ2VPJ9 315 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 PLPPR5Q32ZL2 321 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 ZNF514Q96K75 400 aaPredicted RBP0.86□□□□□ -2.27
CALD1-219ENST00000480638 CFAP53Q96M91 514 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 SMG1Q96Q15 3661 aaKnown RBP0.86□□□□□ -2.27
CALD1-219ENST00000480638 FRYQ5TBA9 3013 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 NESP48681 1621 aa0.86□□□□□ -2.27
CALD1-219ENST00000480638 C5orf49A4QMS7 147 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 TECTAO75443 2155 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 NPPAP01160 153 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 HIST1H4AP62805 103 aaKnown RBP0.85□□□□□ -2.27
CALD1-219ENST00000480638 RPS24P62847 133 aaKnown RBP0.85□□□□□ -2.27
CALD1-219ENST00000480638 HLA-DRB3P79483 266 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 NUP160Q12769 1436 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 TMED1Q13445 227 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 JOSD1Q15040 202 aaPredicted RBP0.85□□□□□ -2.27
CALD1-219ENST00000480638 ACSM3Q53FZ2 586 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 FAM173BQ6P4H8 233 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 RASSF6Q6ZTQ3 369 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 SLC37A2Q8TED4 501 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 CHST6Q9GZX3 395 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 RIMS2Q9UQ26 1411 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 TOP2BQ02880 1626 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 XIRP2A4UGR9 3374 aa0.85□□□□□ -2.27
CALD1-219ENST00000480638 IGF2RP11717 2491 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 PCNX1Q96RV3 2341 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 HERC2O95714 4834 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 TGP01266 2768 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 FTCDNL1E5RQL4 147 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 M0QX08 132 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 TFPTP0C1Z6 253 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 CLDN12P56749 244 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 PMS2P3Q13401 168 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 SAPCD1Q5SSQ6 148 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 SPATA24Q86W54 205 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 RPP25LQ8N5L8 163 aaKnown RBP0.84□□□□□ -2.27
CALD1-219ENST00000480638 TIPINQ9BVW5 301 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 SLC22A4Q9H015 551 aa0.84□□□□□ -2.27
CALD1-219ENST00000480638 SCAF11Q99590 1463 aaKnown RBP0.84□□□□□ -2.28
CALD1-219ENST00000480638 ARFGEF3Q5TH69 2177 aa0.84□□□□□ -2.28
CALD1-219ENST00000480638 POLEQ07864 2286 aa0.84□□□□□ -2.28
CALD1-219ENST00000480638 PRRC2CQ9Y520 2896 aaKnown RBP0.83□□□□□ -2.28
CALD1-219ENST00000480638 PRUNE2Q8WUY3 3088 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 APCP25054 2843 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 A0A1B0GW54 56 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 OR51F1A6NGY5 319 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 NEMFO60524 1076 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 NDUFS6O75380 124 aaKnown RBP0.83□□□□□ -2.28
CALD1-219ENST00000480638 IL6P05231 212 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 CCL5P13501 91 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 CASQ1P31415 396 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 SLCO1A2P46721 670 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 ANGPT1Q15389 498 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 DCXRQ7Z4W1 244 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 TMEM86AQ8N2M4 240 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 CCL13Q99616 98 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 MS4A6AQ9H2W1 248 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 HES4Q9HCC6 221 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 NAT8Q9UHE5 227 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 CFAP45Q9UL16 551 aa0.83□□□□□ -2.28
CALD1-219ENST00000480638 DSPP15924 2871 aaKnown RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms