RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CHST1O43916 411 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 SSSCA1O60232 199 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 DEDDO75618 318 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 OPN1MWP04001 364 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 PET100P0DJ07 73 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 OPN1MW2P0DN77 364 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 OPN1MW3P0DN78 364 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 SLC25A4P12235 298 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 SPCS3P61009 180 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 HSPE1P61604 102 aaKnown RBP14.01□□□□□ -0.17
UPF3A-206ENST00000480362 LY6EQ16553 131 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 C5orf64Q2M2E5 130 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 SPINK9Q5DT21 86 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 CLEC9AQ6UXN8 241 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 Q6YL49 198 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 TMEM219Q86XT9 240 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 RBM14Q96PK6 669 aaKnown RBP14.01□□□□□ -0.17
UPF3A-206ENST00000480362 COMMD5Q9GZQ3 224 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 PRDM13Q9H4Q3 707 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 MBD2Q9UBB5 411 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 CACFD1Q9UGQ2 172 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 TCF19Q9Y242 345 aa14.01□□□□□ -0.17
UPF3A-206ENST00000480362 FXYD6-FXYD2A0A087WZ82 144 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 MED6O75586 246 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 LYL1P12980 280 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 IER3P46695 156 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 TNXAQ16473 311 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 Q8N9W7 124 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 HYLS1Q96M11 299 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 SLC25A33Q9BSK2 321 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 ZNF257Q9Y2Q1 563 aa14□□□□□ -0.17
UPF3A-206ENST00000480362 ZNF469Q96JG9 3925 aaPredicted RBP14□□□□□ -0.17
UPF3A-206ENST00000480362 NOTCH2Q04721 2471 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 CEBPZOSA8MTT3 80 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 L7N2F9 121 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 OR2F2O95006 317 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 IGHV4-59P01825 116 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 FGF2P09038 288 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 IAPPP10997 89 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 PVALBP20472 110 aaPredicted RBP13.99□□□□□ -0.17
UPF3A-206ENST00000480362 MAS1LP35410 378 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 NKX2-5P52952 324 aaPredicted RBP13.99□□□□□ -0.17
UPF3A-206ENST00000480362 GNB1P62873 340 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 VAMP2P63027 116 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 PDLIM3Q53GG5 364 aaPredicted RBP13.99□□□□□ -0.17
UPF3A-206ENST00000480362 OR1L8Q8NGR8 309 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 OR5B3Q8NH48 314 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 DCUN1D4Q92564 292 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 RASL11BQ9BPW5 248 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 HINT2Q9BX68 163 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 C11orf1Q9H5F2 150 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 PITPNC1Q9UKF7 332 aa13.99□□□□□ -0.17
UPF3A-206ENST00000480362 FLNAP21333 2647 aaKnown RBP13.99□□□□□ -0.17
UPF3A-206ENST00000480362 E5RGE8 158 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 E7EUB6 86 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 ACTL6BO94805 426 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 CA2P00918 260 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 EIF2B2P49770 351 aaKnown RBP13.98□□□□□ -0.17
UPF3A-206ENST00000480362 PAX9P55771 341 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 TMEM65Q6PI78 240 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 ZNF546Q86UE3 836 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 SIGLECL1Q8N7X8 197 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 OR5R1Q8NH85 324 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 GRPEL2Q8TAA5 225 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 DTD1Q8TEA8 209 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 RAB40CQ96S21 281 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 GSX1Q9H4S2 264 aaPredicted RBP13.98□□□□□ -0.17
UPF3A-206ENST00000480362 MOB4Q9Y3A3 225 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 CSPG4Q6UVK1 2322 aa13.98□□□□□ -0.17
UPF3A-206ENST00000480362 TET2Q6N021 2002 aaPredicted RBP13.97□□□□□ -0.17
UPF3A-206ENST00000480362 BTBD17A6NE02 478 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 HMSDA8MTL9 139 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 KCNAB3O43448 404 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 TMEM50AO95807 157 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 PRCDQ00LT1 54 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 TUSC1Q2TAM9 212 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 C10orf55Q5SWW7 151 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 Q71RC1 249 aaPredicted RBP13.97□□□□□ -0.17
UPF3A-206ENST00000480362 SMIM8Q96KF7 97 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 NDUFA4L2Q9NRX3 87 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 TNFRSF19Q9NS68 423 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 TEX15Q9BXT5 2789 aa13.97□□□□□ -0.17
UPF3A-206ENST00000480362 CGB1A6NKQ9 187 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 ARPC5O15511 151 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 HOXA3O43365 443 aaPredicted RBP13.96□□□□□ -0.17
UPF3A-206ENST00000480362 CNIH1O95406 144 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 VDAC2P45880 294 aaPredicted RBP13.96□□□□□ -0.17
UPF3A-206ENST00000480362 RPL27AP46776 148 aaKnown RBP13.96□□□□□ -0.17
UPF3A-206ENST00000480362 P2RY1P47900 373 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 HOXA1P49639 335 aaPredicted RBP13.96□□□□□ -0.17
UPF3A-206ENST00000480362 COMPP49747 757 aaPredicted RBP13.96□□□□□ -0.17
UPF3A-206ENST00000480362 RPL23AP62750 156 aaKnown RBP13.96□□□□□ -0.17
UPF3A-206ENST00000480362 SSBP2P81877 361 aaPredicted RBP13.96□□□□□ -0.17
UPF3A-206ENST00000480362 C5orf56Q8N8D9 126 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 SSMEM1Q8WWF3 244 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 ENY2Q9NPA8 101 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 PSENENQ9NZ42 101 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 TNFSF18Q9UNG2 199 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 ZANQ9Y493 2812 aa13.96□□□□□ -0.17
UPF3A-206ENST00000480362 A0A1B0GW64 132 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms