RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 CLEC9AQ6UXN8 241 aa8.41□□□□□ -1.06
LINC00173-203ENST00000480237 ZNF767PQ75MW2 155 aa8.41□□□□□ -1.06
LINC00173-203ENST00000480237 DTD1Q8TEA8 209 aa8.41□□□□□ -1.06
LINC00173-203ENST00000480237 ST8SIA2Q92186 375 aa8.41□□□□□ -1.06
LINC00173-203ENST00000480237 SMIM8Q96KF7 97 aa8.41□□□□□ -1.06
LINC00173-203ENST00000480237 CIB3Q96Q77 187 aaPredicted RBP8.41□□□□□ -1.06
LINC00173-203ENST00000480237 PRNDQ9UKY0 176 aa8.41□□□□□ -1.06
LINC00173-203ENST00000480237 PAIP2BQ9ULR5 123 aaKnown RBP8.41□□□□□ -1.06
LINC00173-203ENST00000480237 FOXA2Q9Y261 457 aaPredicted RBP8.41□□□□□ -1.06
LINC00173-203ENST00000480237 U3KQ87 197 aa8.41□□□□□ -1.06
LINC00173-203ENST00000480237 HECTD1Q9ULT8 2610 aa8.41□□□□□ -1.06
LINC00173-203ENST00000480237 TLN2Q9Y4G6 2542 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 TRAV20A0A0B4J274 112 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 TRAV40A0A0B4J280 105 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 SRRM4A7MD48 611 aaKnown RBP8.4□□□□□ -1.06
LINC00173-203ENST00000480237 OOSP1A8MZH6 123 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 UPK2O00526 184 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 SLC25A17O43808 307 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 TMEM50AO95807 157 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 FGF2P09038 288 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 HOXA1P49639 335 aaPredicted RBP8.4□□□□□ -1.06
LINC00173-203ENST00000480237 PAX9P55771 341 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 TAS2R30P59541 319 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 BAXQ07812 192 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 EXOSC2Q13868 293 aaKnown RBP8.4□□□□□ -1.06
LINC00173-203ENST00000480237 SPANXN5Q5MJ07 72 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 ZNF429Q86V71 674 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 PUSL1Q8N0Z8 303 aaKnown RBP8.4□□□□□ -1.06
LINC00173-203ENST00000480237 LINC01356Q8N9X3 169 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 OR4A5Q8NH83 315 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 TSNAXQ99598 290 aaKnown RBP8.4□□□□□ -1.06
LINC00173-203ENST00000480237 HINT2Q9BX68 163 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 ENY2Q9NPA8 101 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 TMEM14BQ9NUH8 114 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 TCF19Q9Y242 345 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 OR51B2Q9Y5P1 312 aa8.4□□□□□ -1.06
LINC00173-203ENST00000480237 A0A096LNT2 108 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 NPFFO15130 113 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 CST7O76096 145 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 VENTXO95231 258 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 TPT1P13693 172 aaKnown RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 CD1BP29016 333 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 SAA4P35542 130 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 LGALS7P47929 136 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 NHLH2Q02577 135 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 LOXL1Q08397 574 aaPredicted RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 AARDQ4LEZ3 155 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 TMEM252Q8N6L7 170 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 ZNF680Q8NEM1 530 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 OR52E5Q8NH55 327 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 CFHR4Q92496 578 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 Q96MF0 132 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 REG4Q9BYZ8 158 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 HEYLQ9NQ87 328 aaPredicted RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 HIF1ANQ9NWT6 349 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 FKBP11Q9NYL4 201 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 UBQLN2Q9UHD9 624 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 AUP1Q9Y679 476 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 BORCS7-ASMTA0A0B4J1R7 106 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 LY86O95711 162 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 CFDP00746 253 aaPredicted RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 IGKV1D-33P01593 117 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 IGKV1-33P01594 117 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 IGLV2-23P01705 113 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 METTL15P1P0C7V9 234 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 GATA3P23771 443 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 PAX6P26367 422 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 SULT1A1P50225 295 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 DYNLT3P51808 116 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 RPL8P62917 257 aaKnown RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 EIF5AP63241 154 aaKnown RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 HES1Q14469 280 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 CLINT1Q14677 625 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 ALKAL2Q6UX46 152 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 TMEM217Q8N7C4 229 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 MAPK1IP1LQ8NDC0 245 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 OR1S2Q8NGQ3 325 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 STOML3Q8TAV4 291 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 TMEM167AQ8TBQ9 72 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 BSCL2Q96G97 398 aaPredicted RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 COMMD5Q9GZQ3 224 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 HIPK2Q9H2X6 1198 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 GSX1Q9H4S2 264 aaPredicted RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 PLEKHA3Q9HB20 300 aa8.39□□□□□ -1.07
LINC00173-203ENST00000480237 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
LINC00173-203ENST00000480237 MYO9AB2RTY4 2548 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 IGHV3OR16-10A0A075B7F0 116 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 IGHV1-69DA0A0B4J2H0 117 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 CENPVL3A0A0U1RRI6 287 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 MOSP00540 346 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 IGHV1-69P01742 117 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 OPN1MWP04001 364 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 IL6RP08887 468 aaPredicted RBP8.38□□□□□ -1.07
LINC00173-203ENST00000480237 OPN1MW2P0DN77 364 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 OPN1MW3P0DN78 364 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 MYOD1P15172 320 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 CNTFRP26992 372 aa8.38□□□□□ -1.07
LINC00173-203ENST00000480237 HSPE1P61604 102 aaKnown RBP8.38□□□□□ -1.07
LINC00173-203ENST00000480237 HBG1P69891 147 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms