RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 OR1L6Q8NGR2 347 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 OR13F1Q8NGS4 319 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 OR4A5Q8NH83 315 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 LGALS14Q8TCE9 139 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 AIFM2Q9BRQ8 373 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 BET1LQ9NYM9 111 aa9.92□□□□□ -0.82
VCL-205ENST00000478896 IGLV11-55A0A075B6I3 123 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 IGHV3-35A0A0C4DH35 117 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 LY6G6CO95867 125 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 PSMB9P28065 219 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 CATR1Q13166 79 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 ZNF585BQ52M93 769 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 TM4SF20Q53R12 229 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 PLET1Q6UQ28 207 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 UNQ9165/PRO28630Q6UXU0 137 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 BEST4Q8NFU0 473 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 LINC00476Q8WZB0 136 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 OVOL2Q9BRP0 275 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 CCL28Q9NRJ3 127 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 TXNL4BQ9NX01 149 aaKnown RBP9.91□□□□□ -0.82
VCL-205ENST00000478896 THYN1Q9P016 225 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 RRP15Q9Y3B9 282 aaKnown RBP9.91□□□□□ -0.82
VCL-205ENST00000478896 UFC1Q9Y3C8 167 aa9.91□□□□□ -0.82
VCL-205ENST00000478896 CYB5BO43169 146 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 SSX5O60225 188 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 FCGR2CP31995 323 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 APOC4P55056 127 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 BRWD1-AS2P59051 145 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 FXYD4P59646 89 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 SFXN4Q6P4A7 337 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 SLC38A6Q8IZM9 456 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 COMMD5Q9GZQ3 224 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 RHBDL2Q9NX52 303 aa9.9□□□□□ -0.82
VCL-205ENST00000478896 MRPL27Q9P0M9 148 aaKnown RBP9.9□□□□□ -0.82
VCL-205ENST00000478896 TRAV25A0A0B4J276 109 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 NUPR2A6NF83 97 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 CGB1A6NKQ9 187 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 SULT1C2O00338 296 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 HPRT1P00492 218 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 PPYP01298 95 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 PTHLHP12272 177 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 NQO2P16083 231 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 FGF9P31371 208 aaPredicted RBP9.89□□□□□ -0.83
VCL-205ENST00000478896 TAS2R31P59538 309 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 OR2B8PP59922 312 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 GABARAPL2P60520 117 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 MSMO1Q15800 293 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 TPRA1Q86W33 373 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 OR2C3Q8N628 320 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 GVQW1Q8N7I0 195 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 ZBTB34Q8NCN2 500 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 DMBX1Q8NFW5 382 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 ZNF502Q8TBZ5 544 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 SLC5A7Q9GZV3 580 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 UBQLN2Q9UHD9 624 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 SSR3Q9UNL2 185 aa9.89□□□□□ -0.83
VCL-205ENST00000478896 TRAV18A0A075B6X5 111 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 IGLC7A0M8Q6 106 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.83
VCL-205ENST00000478896 FCER2P06734 321 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 ELLP55199 621 aaPredicted RBP9.88□□□□□ -0.83
VCL-205ENST00000478896 MXD1Q05195 221 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 KLK9Q2XQG4 91 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 DEFB135Q30KP9 77 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 AADACL3Q5VUY0 350 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 LYG2Q86SG7 212 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 TMEM17Q86X19 198 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 OR51H1Q8NH63 302 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 SPAG8Q99932 426 aaPredicted RBP9.88□□□□□ -0.83
VCL-205ENST00000478896 TMEM140Q9NV12 185 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 KLK9Q9UKQ9 250 aa9.88□□□□□ -0.83
VCL-205ENST00000478896 ALMS1Q8TCU4 4167 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 TRAV3A0A0B4J244 114 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 OR2T8A6NH00 312 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 UPK2O00526 184 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 TGOLN2O43493 480 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 SPRY2O43597 315 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 MRPS14O60783 128 aaKnown RBP9.87□□□□□ -0.83
VCL-205ENST00000478896 C8orf88P0DMB2 117 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 RPA2P15927 270 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 PTBP1P26599 531 aaKnown RBP eCLIP9.87□□□□□ -0.833e-7■■■■■ 26.9
VCL-205ENST00000478896 BMI1P35226 326 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 ERVK-16P61578 105 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 UBE2UQ5VVX9 321 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 THOC7Q6I9Y2 204 aaKnown RBP9.87□□□□□ -0.83
VCL-205ENST00000478896 HOGA1Q86XE5 327 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 TMEM190Q8WZ59 177 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 FCGR1BQ92637 280 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 SRSF8Q9BRL6 282 aaKnown RBP9.87□□□□□ -0.83
VCL-205ENST00000478896 QTRT1Q9BXR0 403 aaKnown RBP9.87□□□□□ -0.83
VCL-205ENST00000478896 ZNF436Q9C0F3 470 aaPredicted RBP9.87□□□□□ -0.83
VCL-205ENST00000478896 C5orf66Q9H5L9 145 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 DAZ1Q9NQZ3 744 aaKnown RBP9.87□□□□□ -0.83
VCL-205ENST00000478896 TP53TG1Q9Y2A0 90 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 ETV7Q9Y603 341 aa9.87□□□□□ -0.83
VCL-205ENST00000478896 S1PR2O95136 353 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 SDC2P34741 201 aa9.86□□□□□ -0.83
VCL-205ENST00000478896 HERV-K104P61576 105 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms