RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 NEK7Q8TDX7 302 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 HPSE2Q8WWQ2 592 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 C22orf15Q8WYQ4 148 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 DPF1Q92782 380 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 MOB3AQ96BX8 217 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 RNF125Q96EQ8 232 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF488Q96MN9 340 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF48Q96MX3 618 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 TP53RKQ96S44 253 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 CLCC1Q96S66 551 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 PCGF1Q9BSM1 259 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 C20orf24Q9BUV8 137 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 FGF23Q9GZV9 251 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 MAGT1Q9H0U3 335 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SIRPDQ9H106 197 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SH3BGRL3Q9H299 93 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 PLEKHA2Q9HB19 425 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SPACA1Q9HBV2 294 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 BIN3Q9NQY0 253 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 PARP11Q9NR21 331 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SMCO4Q9NRQ5 59 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SERTAD4Q9NUC0 356 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 UFSP2Q9NUQ7 469 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 CTSZQ9UBR2 303 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 CACFD1Q9UGQ2 172 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 RPUSD1Q9UJJ7 312 aaKnown RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 VPREB3Q9UKI3 123 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 HSF4Q9ULV5 492 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 UBE2J1Q9Y385 318 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 TRAV39A0A0B4J263 110 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 C3orf85A0A1B0GTC6 90 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 hCG_1809904A0A1W2PP81 198 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 A0A1W2PPE2 198 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 A0A1W2PR64 198 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 A0A1W2PRV1 198 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 PQLC2LA1A4F0 135 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 CLPSL1A2RUU4 121 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF98A6NK75 572 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 LINC01548A6NM66 108 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 COLCA2A8K830 154 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 C1orf196B1AJZ1 125 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF732B4DXR9 585 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 H0YL77 283 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 DVL1O14640 695 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 ST8SIA3O43173 380 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 TNFSF12O43508 249 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 NDUFB3O43676 98 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 SYNGR1O43759 233 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 LHBP01229 141 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 PPYP01298 95 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 RBP4P02753 201 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 CD5P06127 495 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 SCTP09683 121 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 SEC11BP0C7V7 166 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 OR13C7P0DN81 318 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 SPP1P10451 314 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF44P15621 663 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 FUT3P21217 361 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 OMGP23515 440 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 GNRHRP30968 328 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 SNCAP37840 140 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 PMELP40967 661 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 P2RY1P47900 373 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 HOXA1P49639 335 aaPredicted RBP3.42□□□□□ -1.86
VPS13D-206ENST00000476045 FHITP49789 147 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 RAB13P51153 203 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 GPM6AP51674 278 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 CEBPGP53567 150 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 RBM11P57052 281 aaKnown RBP3.42□□□□□ -1.86
VPS13D-206ENST00000476045 POLR2GP62487 172 aaKnown RBP eCLIP3.42□□□□□ -1.86
VPS13D-206ENST00000476045 GNG3P63215 75 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 CCL20P78556 96 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
VPS13D-206ENST00000476045 IL13RA2Q14627 380 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 DEFB112Q30KQ8 113 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 KRBOX4Q5JUW0 171 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 TMEM42Q69YG0 159 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 WDR82Q6UXN9 313 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 BRD3OSQ6XYD6 125 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 TBC1D26Q86UD7 250 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 CALHM1Q8IU99 346 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF695Q8IW36 515 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 SELENOHQ8IZQ5 122 aaKnown RBP3.42□□□□□ -1.86
VPS13D-206ENST00000476045 SLC35G3Q8N808 338 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 OR4D5Q8NGN0 318 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 CD300LFQ8TDQ1 290 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 GLYATL2Q8WU03 294 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 LRRC29Q8WV35 223 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 HIST1H2BAQ96A08 127 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 TBX15Q96SF7 602 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 CITED1Q99966 193 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 GINS3Q9BRX5 216 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 DCTN5Q9BTE1 182 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 ABHD14AQ9BUJ0 271 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 EIF5A2Q9GZV4 153 aaKnown RBP3.42□□□□□ -1.86
VPS13D-206ENST00000476045 FAM234AQ9H0X4 552 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 ARV1Q9H2C2 271 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 CCL28Q9NRJ3 127 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 SLC2A9Q9NRM0 540 aa3.42□□□□□ -1.86
VPS13D-206ENST00000476045 FAM212BQ9NTI7 297 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms